==2055546== Memcheck, a memory error detector ==2055546== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2055546== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2055546== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==2055546== Parent PID: 2046931 ==2055546== ==2055546== ==2055546== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2055546== Open file descriptor 12: ==2055546== at 0x10CD026D: pipe (pipe.c:29) ==2055546== by 0x1976C07D: ??? ==2055546== by 0x14D0D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2055546== by 0x10836418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2055546== by 0x107CFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2055546== by 0xF4C6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2055546== by 0xF3382DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2055546== by 0xF33832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2055546== by 0x260FE5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2055546== by 0x25974B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2055546== by 0x25E26A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2055546== by 0x25E10B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2055546== by 0x25E7A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2055546== by 0x255DB5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==2055546== ==2055546== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2055546== at 0x10CD4C0C: __open_nocancel (open64_nocancel.c:39) ==2055546== by 0x10C58BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2055546== by 0xF36D822: ??? ==2055546== by 0xF36D96F: ??? ==2055546== by 0x14DB26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2055546== by 0x14DB2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2055546== by 0x14D68922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2055546== by 0x14D0D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2055546== by 0x10836418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2055546== by 0x107CFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2055546== by 0xF4C6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2055546== by 0xF3382DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2055546== by 0xF33832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2055546== by 0x260FE5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2055546== by 0x25974B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2055546== by 0x25E26A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2055546== by 0x25E10B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2055546== by 0x25E7A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2055546== by 0x255DB5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==2055546== ==2055546== Open file descriptor 115: ==2055546== ==2055546== ==2055546== Open file descriptor 112: ==2055546== ==2055546== ==2055546== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==2055546== ==2055546== ==2055546== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2055546== ==2055546== ==2055546== ==2055546== HEAP SUMMARY: ==2055546== in use at exit: 857,961 bytes in 12,109 blocks ==2055546== total heap usage: 3,792,374 allocs, 3,780,265 frees, 1,712,078,558 bytes allocated ==2055546== ==2055546== LEAK SUMMARY: ==2055546== definitely lost: 0 bytes in 0 blocks ==2055546== indirectly lost: 0 bytes in 0 blocks ==2055546== possibly lost: 0 bytes in 0 blocks ==2055546== still reachable: 56 bytes in 3 blocks ==2055546== suppressed: 857,905 bytes in 12,106 blocks ==2055546== Reachable blocks (those to which a pointer was found) are not shown. ==2055546== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2055546== ==2055546== For lists of detected and suppressed errors, rerun with: -s ==2055546== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)