==2048424== Memcheck, a memory error detector ==2048424== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2048424== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2048424== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestDeltaNotchOdeSystem -malloc_debug -malloc_dump -memory_info ==2048424== Parent PID: 2046931 ==2048424== ==2048424== ==2048424== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2048424== Open file descriptor 12: ==2048424== at 0xEF8F26D: pipe (pipe.c:29) ==2048424== by 0x1976C07D: ??? ==2048424== by 0x139044CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2048424== by 0xEBDC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2048424== by 0xEB75D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2048424== by 0xD86CD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2048424== by 0xD6DE2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2048424== by 0xD6DE32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2048424== by 0x123193: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2048424== by 0x11E6C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2048424== by 0x120CDC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2048424== by 0x120BD8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2048424== by 0x1211EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2048424== by 0x11CEC5: main (TestDeltaNotchOdeSystem.cpp:18) ==2048424== ==2048424== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2048424== at 0xEF93C0C: __open_nocancel (open64_nocancel.c:39) ==2048424== by 0xEF17BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2048424== by 0xD713822: ??? ==2048424== by 0xD71396F: ??? ==2048424== by 0x139A96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2048424== by 0x139A9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2048424== by 0x1395F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2048424== by 0x139042DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2048424== by 0xEBDC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2048424== by 0xEB75D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2048424== by 0xD86CD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2048424== by 0xD6DE2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2048424== by 0xD6DE32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2048424== by 0x123193: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2048424== by 0x11E6C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2048424== by 0x120CDC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2048424== by 0x120BD8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2048424== by 0x1211EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2048424== by 0x11CEC5: main (TestDeltaNotchOdeSystem.cpp:18) ==2048424== ==2048424== Open file descriptor 115: ==2048424== ==2048424== ==2048424== Open file descriptor 112: ==2048424== ==2048424== ==2048424== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestDeltaNotchOdeSystem_valgrind.txt ==2048424== ==2048424== ==2048424== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2048424== ==2048424== ==2048424== ==2048424== HEAP SUMMARY: ==2048424== in use at exit: 857,992 bytes in 12,112 blocks ==2048424== total heap usage: 62,057 allocs, 49,945 frees, 1,543,410,832 bytes allocated ==2048424== ==2048424== LEAK SUMMARY: ==2048424== definitely lost: 0 bytes in 0 blocks ==2048424== indirectly lost: 0 bytes in 0 blocks ==2048424== possibly lost: 0 bytes in 0 blocks ==2048424== still reachable: 24 bytes in 2 blocks ==2048424== suppressed: 857,968 bytes in 12,110 blocks ==2048424== Reachable blocks (those to which a pointer was found) are not shown. ==2048424== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2048424== ==2048424== For lists of detected and suppressed errors, rerun with: -s ==2048424== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)