==2047502== Memcheck, a memory error detector ==2047502== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2047502== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2047502== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestDistanceMapCalculator -malloc_debug -malloc_dump -memory_info ==2047502== Parent PID: 2046931 ==2047502== ==2047502== ==2047502== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2047502== Open file descriptor 12: ==2047502== at 0x69F526D: pipe (pipe.c:29) ==2047502== by 0x1018C07D: ??? ==2047502== by 0xBAC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2047502== by 0x8040418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2047502== by 0x7FD9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2047502== by 0x6CD0D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2047502== by 0x65542DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2047502== by 0x655432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2047502== by 0x121264: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2047502== by 0x11C8CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2047502== by 0x11EF8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2047502== by 0x11EE2C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2047502== by 0x11F4C3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2047502== by 0x11ACF5: main (TestDistanceMapCalculator.cpp:19) ==2047502== ==2047502== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2047502== at 0x69F9C0C: __open_nocancel (open64_nocancel.c:39) ==2047502== by 0x697DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2047502== by 0x6589822: ??? ==2047502== by 0x658996F: ??? ==2047502== by 0xBB656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2047502== by 0xBB65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2047502== by 0xBB1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2047502== by 0xBAC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2047502== by 0x8040418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2047502== by 0x7FD9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2047502== by 0x6CD0D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2047502== by 0x65542DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2047502== by 0x655432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2047502== by 0x121264: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2047502== by 0x11C8CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2047502== by 0x11EF8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2047502== by 0x11EE2C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2047502== by 0x11F4C3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2047502== by 0x11ACF5: main (TestDistanceMapCalculator.cpp:19) ==2047502== ==2047502== Open file descriptor 115: ==2047502== ==2047502== ==2047502== Open file descriptor 112: ==2047502== ==2047502== ==2047502== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestDistanceMapCalculator_valgrind.txt ==2047502== ==2047502== ==2047502== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2047502== ==2047502== ==2047502== ==2047502== HEAP SUMMARY: ==2047502== in use at exit: 860,385 bytes in 12,109 blocks ==2047502== total heap usage: 7,660,481 allocs, 7,648,372 frees, 1,808,840,223 bytes allocated ==2047502== ==2047502== LEAK SUMMARY: ==2047502== definitely lost: 0 bytes in 0 blocks ==2047502== indirectly lost: 0 bytes in 0 blocks ==2047502== possibly lost: 0 bytes in 0 blocks ==2047502== still reachable: 2,576 bytes in 3 blocks ==2047502== suppressed: 857,809 bytes in 12,106 blocks ==2047502== Reachable blocks (those to which a pointer was found) are not shown. ==2047502== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2047502== ==2047502== For lists of detected and suppressed errors, rerun with: -s ==2047502== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 16 from 16)