==2048290== Memcheck, a memory error detector ==2048290== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2048290== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2048290== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticGrowingDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==2048290== Parent PID: 2046931 ==2048290== ==2048290== ==2048290== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2048290== Open file descriptor 12: ==2048290== at 0x10D0026D: pipe (pipe.c:29) ==2048290== by 0x1976D07D: ??? ==2048290== by 0x14CC64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2048290== by 0x1094D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2048290== by 0x108E6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2048290== by 0xF5BAD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2048290== by 0xF4912DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2048290== by 0xF49132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2048290== by 0x12F317: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2048290== by 0x12A26D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2048290== by 0x12CD58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2048290== by 0x12CBF8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2048290== by 0x12D28F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2048290== by 0x128695: main (TestSimulationsWithEllipticGrowingDomainPdeModifier.cpp:19) ==2048290== ==2048290== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2048290== at 0x10D04C0C: __open_nocancel (open64_nocancel.c:39) ==2048290== by 0x10C88BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2048290== by 0x10844822: ??? ==2048290== by 0x1084496F: ??? ==2048290== by 0x14D6B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2048290== by 0x14D6B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2048290== by 0x14D21922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2048290== by 0x14CC62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2048290== by 0x1094D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2048290== by 0x108E6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2048290== by 0xF5BAD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2048290== by 0xF4912DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2048290== by 0xF49132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2048290== by 0x12F317: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2048290== by 0x12A26D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2048290== by 0x12CD58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2048290== by 0x12CBF8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2048290== by 0x12D28F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2048290== by 0x128695: main (TestSimulationsWithEllipticGrowingDomainPdeModifier.cpp:19) ==2048290== ==2048290== Open file descriptor 115: ==2048290== ==2048290== ==2048290== Open file descriptor 112: ==2048290== ==2048290== ==2048290== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticGrowingDomainPdeModifier_valgrind.txt ==2048290== ==2048290== ==2048290== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2048290== ==2048290== ==2048290== ==2048290== HEAP SUMMARY: ==2048290== in use at exit: 857,961 bytes in 12,109 blocks ==2048290== total heap usage: 5,186,592 allocs, 5,174,483 frees, 2,523,964,920 bytes allocated ==2048290== ==2048290== LEAK SUMMARY: ==2048290== definitely lost: 0 bytes in 0 blocks ==2048290== indirectly lost: 0 bytes in 0 blocks ==2048290== possibly lost: 0 bytes in 0 blocks ==2048290== still reachable: 56 bytes in 3 blocks ==2048290== suppressed: 857,905 bytes in 12,106 blocks ==2048290== Reachable blocks (those to which a pointer was found) are not shown. ==2048290== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2048290== ==2048290== For lists of detected and suppressed errors, rerun with: -s ==2048290== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)