==2076439== Memcheck, a memory error detector ==2076439== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2076439== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2076439== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==2076439== Parent PID: 2074753 ==2076439== ==2076439== ==2076439== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2076439== Open file descriptor 12: ==2076439== at 0xE82326D: pipe (pipe.c:29) ==2076439== by 0x18AE507D: ??? ==2076439== by 0x140824CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2076439== by 0x104C0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2076439== by 0x10459D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2076439== by 0xF150D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2076439== by 0xE46C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2076439== by 0xE46C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2076439== by 0x12211E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2076439== by 0x11D8CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2076439== by 0x11FC58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2076439== by 0x11FAF8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2076439== by 0x12018F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2076439== by 0x11BCF5: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==2076439== ==2076439== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2076439== at 0xE827C0C: __open_nocancel (open64_nocancel.c:39) ==2076439== by 0xE7ABBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2076439== by 0xE4A0822: ??? ==2076439== by 0xE4A096F: ??? ==2076439== by 0x141276DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2076439== by 0x14127938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2076439== by 0x140DD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2076439== by 0x140822DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2076439== by 0x104C0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2076439== by 0x10459D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2076439== by 0xF150D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2076439== by 0xE46C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2076439== by 0xE46C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2076439== by 0x12211E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2076439== by 0x11D8CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2076439== by 0x11FC58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2076439== by 0x11FAF8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2076439== by 0x12018F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2076439== by 0x11BCF5: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==2076439== ==2076439== Open file descriptor 115: ==2076439== ==2076439== ==2076439== Open file descriptor 112: ==2076439== ==2076439== ==2076439== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==2076439== ==2076439== ==2076439== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2076439== ==2076439== ==2076439== ==2076439== HEAP SUMMARY: ==2076439== in use at exit: 858,024 bytes in 12,113 blocks ==2076439== total heap usage: 1,078,167 allocs, 1,066,054 frees, 1,617,999,827 bytes allocated ==2076439== ==2076439== LEAK SUMMARY: ==2076439== definitely lost: 0 bytes in 0 blocks ==2076439== indirectly lost: 0 bytes in 0 blocks ==2076439== possibly lost: 0 bytes in 0 blocks ==2076439== still reachable: 56 bytes in 3 blocks ==2076439== suppressed: 857,968 bytes in 12,110 blocks ==2076439== Reachable blocks (those to which a pointer was found) are not shown. ==2076439== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2076439== ==2076439== For lists of detected and suppressed errors, rerun with: -s ==2076439== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)