==2078392== Memcheck, a memory error detector ==2078392== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2078392== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2078392== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2078392== Parent PID: 2074753 ==2078392== ==2078392== ==2078392== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2078392== Open file descriptor 12: ==2078392== at 0xE94C26D: pipe (pipe.c:29) ==2078392== by 0x18AE507D: ??? ==2078392== by 0x140824CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2078392== by 0x105A9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2078392== by 0x10542D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2078392== by 0xF237D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2078392== by 0xE46C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2078392== by 0xE46C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2078392== by 0x1D75B0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2078392== by 0x1CF0F9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2078392== by 0x1D2914: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2078392== by 0x1D27B4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2078392== by 0x1D2E4B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2078392== by 0x1CD515: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==2078392== ==2078392== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2078392== at 0xE950C0C: __open_nocancel (open64_nocancel.c:39) ==2078392== by 0xE8D4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2078392== by 0xE4A0822: ??? ==2078392== by 0xE4A096F: ??? ==2078392== by 0x141276DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2078392== by 0x14127938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2078392== by 0x140DD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2078392== by 0x140822DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2078392== by 0x105A9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2078392== by 0x10542D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2078392== by 0xF237D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2078392== by 0xE46C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2078392== by 0xE46C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2078392== by 0x1D75B0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2078392== by 0x1CF0F9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2078392== by 0x1D2914: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2078392== by 0x1D27B4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2078392== by 0x1D2E4B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2078392== by 0x1CD515: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==2078392== ==2078392== Open file descriptor 115: ==2078392== ==2078392== ==2078392== Open file descriptor 112: ==2078392== ==2078392== ==2078392== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==2078392== ==2078392== ==2078392== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2078392== ==2078392== ==2078392== ==2078392== HEAP SUMMARY: ==2078392== in use at exit: 857,977 bytes in 12,110 blocks ==2078392== total heap usage: 10,878,699 allocs, 10,866,589 frees, 2,376,746,584 bytes allocated ==2078392== ==2078392== LEAK SUMMARY: ==2078392== definitely lost: 0 bytes in 0 blocks ==2078392== indirectly lost: 0 bytes in 0 blocks ==2078392== possibly lost: 0 bytes in 0 blocks ==2078392== still reachable: 72 bytes in 4 blocks ==2078392== suppressed: 857,905 bytes in 12,106 blocks ==2078392== Reachable blocks (those to which a pointer was found) are not shown. ==2078392== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2078392== ==2078392== For lists of detected and suppressed errors, rerun with: -s ==2078392== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)