==2680407== Memcheck, a memory error detector ==2680407== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2680407== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2680407== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellKillers -malloc_debug -malloc_dump -memory_info ==2680407== Parent PID: 2678878 ==2680407== ==2680407== ==2680407== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2680407== Open file descriptor 12: ==2680407== at 0x1015807D: pipe (pipe.c:29) ==2680407== by 0x18A2207D: ??? ==2680407== by 0x13F934CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2680407== by 0xF979418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2680407== by 0xF912D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2680407== by 0xE609D38: PetscInitialize (pinit.c:924) ==2680407== by 0xE471153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2680407== by 0xE4711A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2680407== by 0x1A4341: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2680407== by 0x19C239: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2680407== by 0x19F87C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2680407== by 0x19F71C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2680407== by 0x19FDB3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2680407== by 0x19A655: main (TestCellKillers.cpp:19) ==2680407== ==2680407== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2680407== at 0x1015CA1C: __open_nocancel (open64_nocancel.c:39) ==2680407== by 0x100E0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2680407== by 0xE4AB822: ??? ==2680407== by 0xE4AB96F: ??? ==2680407== by 0x1403A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2680407== by 0x1403A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2680407== by 0x13FF0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2680407== by 0x13F932DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2680407== by 0xF979418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2680407== by 0xF912D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2680407== by 0xE609D38: PetscInitialize (pinit.c:924) ==2680407== by 0xE471153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2680407== by 0xE4711A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2680407== by 0x1A4341: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2680407== by 0x19C239: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2680407== by 0x19F87C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2680407== by 0x19F71C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2680407== by 0x19FDB3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2680407== by 0x19A655: main (TestCellKillers.cpp:19) ==2680407== ==2680407== Open file descriptor 115: ==2680407== ==2680407== ==2680407== Open file descriptor 112: ==2680407== ==2680407== ==2680407== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellKillers_valgrind.txt ==2680407== ==2680407== ==2680407== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2680407== ==2680407== ==2680407== ==2680407== HEAP SUMMARY: ==2680407== in use at exit: 835,633 bytes in 11,677 blocks ==2680407== total heap usage: 127,611 allocs, 115,934 frees, 1,545,840,349 bytes allocated ==2680407== ==2680407== LEAK SUMMARY: ==2680407== definitely lost: 0 bytes in 0 blocks ==2680407== indirectly lost: 0 bytes in 0 blocks ==2680407== possibly lost: 0 bytes in 0 blocks ==2680407== still reachable: 56 bytes in 3 blocks ==2680407== suppressed: 835,577 bytes in 11,674 blocks ==2680407== Reachable blocks (those to which a pointer was found) are not shown. ==2680407== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2680407== ==2680407== For lists of detected and suppressed errors, rerun with: -s ==2680407== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 38 from 38)