==2680077== Memcheck, a memory error detector ==2680077== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2680077== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2680077== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==2680077== Parent PID: 2678878 ==2680077== ==2680077== ==2680077== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2680077== Open file descriptor 12: ==2680077== at 0xE6A007D: pipe (pipe.c:29) ==2680077== by 0x18A2207D: ??? ==2680077== by 0x12FD14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2680077== by 0xE2ED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2680077== by 0xE286D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2680077== by 0xCF7DD38: PetscInitialize (pinit.c:924) ==2680077== by 0xCDE5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2680077== by 0xCDE51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2680077== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2680077== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2680077== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2680077== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2680077== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2680077== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==2680077== ==2680077== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2680077== at 0xE6A4A1C: __open_nocancel (open64_nocancel.c:39) ==2680077== by 0xE628BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2680077== by 0xCE1F822: ??? ==2680077== by 0xCE1F96F: ??? ==2680077== by 0x130766DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2680077== by 0x13076938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2680077== by 0x1302C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2680077== by 0x12FD12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2680077== by 0xE2ED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2680077== by 0xE286D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2680077== by 0xCF7DD38: PetscInitialize (pinit.c:924) ==2680077== by 0xCDE5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2680077== by 0xCDE51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2680077== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2680077== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2680077== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2680077== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2680077== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2680077== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==2680077== ==2680077== Open file descriptor 115: ==2680077== ==2680077== ==2680077== Open file descriptor 112: ==2680077== ==2680077== ==2680077== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==2680077== ==2680077== ==2680077== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2680077== ==2680077== ==2680077== ==2680077== HEAP SUMMARY: ==2680077== in use at exit: 835,580 bytes in 11,674 blocks ==2680077== total heap usage: 4,187,168 allocs, 4,175,494 frees, 1,971,773,588 bytes allocated ==2680077== ==2680077== LEAK SUMMARY: ==2680077== definitely lost: 0 bytes in 0 blocks ==2680077== indirectly lost: 0 bytes in 0 blocks ==2680077== possibly lost: 0 bytes in 0 blocks ==2680077== still reachable: 72 bytes in 4 blocks ==2680077== suppressed: 835,508 bytes in 11,670 blocks ==2680077== Reachable blocks (those to which a pointer was found) are not shown. ==2680077== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2680077== ==2680077== For lists of detected and suppressed errors, rerun with: -s ==2680077== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)