==2694154== Memcheck, a memory error detector ==2694154== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2694154== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2694154== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==2694154== Parent PID: 2678878 ==2694154== ==2694154== ==2694154== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2694154== Open file descriptor 12: ==2694154== at 0x1002F07D: pipe (pipe.c:29) ==2694154== by 0x18A2207D: ??? ==2694154== by 0x13F934CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2694154== by 0xF937418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2694154== by 0xF8D0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2694154== by 0xE599D38: PetscInitialize (pinit.c:924) ==2694154== by 0xE471153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2694154== by 0xE4711A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2694154== by 0x1222CD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2694154== by 0x11D84D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2694154== by 0x11FE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2694154== by 0x11FCDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2694154== by 0x120373: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2694154== by 0x11BC75: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==2694154== ==2694154== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2694154== at 0x10033A1C: __open_nocancel (open64_nocancel.c:39) ==2694154== by 0xFFB7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2694154== by 0xF829822: ??? ==2694154== by 0xF82996F: ??? ==2694154== by 0x1403A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2694154== by 0x1403A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2694154== by 0x13FF0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2694154== by 0x13F932DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2694154== by 0xF937418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2694154== by 0xF8D0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2694154== by 0xE599D38: PetscInitialize (pinit.c:924) ==2694154== by 0xE471153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2694154== by 0xE4711A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2694154== by 0x1222CD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2694154== by 0x11D84D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2694154== by 0x11FE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2694154== by 0x11FCDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2694154== by 0x120373: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2694154== by 0x11BC75: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==2694154== ==2694154== Open file descriptor 115: ==2694154== ==2694154== ==2694154== Open file descriptor 112: ==2694154== ==2694154== ==2694154== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==2694154== ==2694154== ==2694154== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2694154== ==2694154== ==2694154== ==2694154== HEAP SUMMARY: ==2694154== in use at exit: 835,564 bytes in 11,673 blocks ==2694154== total heap usage: 3,509,510 allocs, 3,497,837 frees, 2,472,162,237 bytes allocated ==2694154== ==2694154== LEAK SUMMARY: ==2694154== definitely lost: 0 bytes in 0 blocks ==2694154== indirectly lost: 0 bytes in 0 blocks ==2694154== possibly lost: 0 bytes in 0 blocks ==2694154== still reachable: 56 bytes in 3 blocks ==2694154== suppressed: 835,508 bytes in 11,670 blocks ==2694154== Reachable blocks (those to which a pointer was found) are not shown. ==2694154== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2694154== ==2694154== For lists of detected and suppressed errors, rerun with: -s ==2694154== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 39)