==2694524== Memcheck, a memory error detector ==2694524== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2694524== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2694524== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexBasedCellPopulationForCrypt -malloc_debug -malloc_dump -memory_info ==2694524== Parent PID: 2678878 ==2694524== ==2694524== ==2694524== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2694524== Open file descriptor 12: ==2694524== at 0x118EF07D: pipe (pipe.c:29) ==2694524== by 0x1A6E207D: ??? ==2694524== by 0x158524CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2694524== by 0x111F7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2694524== by 0x11190D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2694524== by 0xFE59D38: PetscInitialize (pinit.c:924) ==2694524== by 0xFD31153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2694524== by 0xFD311A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2694524== by 0x11D953: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2694524== by 0x119133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2694524== by 0x11B52C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2694524== by 0x11B427: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2694524== by 0x11BA3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2694524== by 0x117935: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==2694524== ==2694524== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2694524== at 0x118F3A1C: __open_nocancel (open64_nocancel.c:39) ==2694524== by 0x11877BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2694524== by 0x110E9822: ??? ==2694524== by 0x110E996F: ??? ==2694524== by 0x158F96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2694524== by 0x158F9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2694524== by 0x158AF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2694524== by 0x158522DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2694524== by 0x111F7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2694524== by 0x11190D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2694524== by 0xFE59D38: PetscInitialize (pinit.c:924) ==2694524== by 0xFD31153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2694524== by 0xFD311A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2694524== by 0x11D953: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2694524== by 0x119133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2694524== by 0x11B52C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2694524== by 0x11B427: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2694524== by 0x11BA3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2694524== by 0x117935: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==2694524== ==2694524== Open file descriptor 115: ==2694524== ==2694524== ==2694524== Open file descriptor 112: ==2694524== ==2694524== ==2694524== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexBasedCellPopulationForCrypt_valgrind.txt ==2694524== ==2694524== ==2694524== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2694524== ==2694524== ==2694524== ==2694524== HEAP SUMMARY: ==2694524== in use at exit: 835,729 bytes in 11,678 blocks ==2694524== total heap usage: 61,762 allocs, 50,084 frees, 1,540,658,911 bytes allocated ==2694524== ==2694524== LEAK SUMMARY: ==2694524== definitely lost: 0 bytes in 0 blocks ==2694524== indirectly lost: 0 bytes in 0 blocks ==2694524== possibly lost: 0 bytes in 0 blocks ==2694524== still reachable: 136 bytes in 4 blocks ==2694524== suppressed: 835,593 bytes in 11,674 blocks ==2694524== Reachable blocks (those to which a pointer was found) are not shown. ==2694524== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2694524== ==2694524== For lists of detected and suppressed errors, rerun with: -s ==2694524== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)