==2116971== Memcheck, a memory error detector ==2116971== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2116971== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2116971== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==2116971== Parent PID: 2115830 ==2116971== ==2116971== ==2116971== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2116971== Open file descriptor 12: ==2116971== at 0xE69126D: pipe (pipe.c:29) ==2116971== by 0x18AE507D: ??? ==2116971== by 0x12C7A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2116971== by 0xE2DE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2116971== by 0xE277D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2116971== by 0xCF6ED38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2116971== by 0xCDE1153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2116971== by 0xCDE11A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2116971== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2116971== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2116971== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2116971== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2116971== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2116971== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==2116971== ==2116971== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2116971== at 0xE695C0C: __open_nocancel (open64_nocancel.c:39) ==2116971== by 0xE619BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2116971== by 0xCE15822: ??? ==2116971== by 0xCE1596F: ??? ==2116971== by 0x12D1F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2116971== by 0x12D1F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2116971== by 0x12CD5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2116971== by 0x12C7A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2116971== by 0xE2DE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2116971== by 0xE277D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2116971== by 0xCF6ED38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2116971== by 0xCDE1153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2116971== by 0xCDE11A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2116971== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2116971== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2116971== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2116971== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2116971== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2116971== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==2116971== ==2116971== Open file descriptor 115: ==2116971== ==2116971== ==2116971== Open file descriptor 112: ==2116971== ==2116971== ==2116971== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==2116971== ==2116971== ==2116971== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2116971== ==2116971== ==2116971== ==2116971== HEAP SUMMARY: ==2116971== in use at exit: 858,024 bytes in 12,113 blocks ==2116971== total heap usage: 555,505 allocs, 543,392 frees, 1,549,180,260 bytes allocated ==2116971== ==2116971== LEAK SUMMARY: ==2116971== definitely lost: 0 bytes in 0 blocks ==2116971== indirectly lost: 0 bytes in 0 blocks ==2116971== possibly lost: 0 bytes in 0 blocks ==2116971== still reachable: 56 bytes in 3 blocks ==2116971== suppressed: 857,968 bytes in 12,110 blocks ==2116971== Reachable blocks (those to which a pointer was found) are not shown. ==2116971== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2116971== ==2116971== For lists of detected and suppressed errors, rerun with: -s ==2116971== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)