==2116960== Memcheck, a memory error detector ==2116960== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2116960== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2116960== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==2116960== Parent PID: 2115830 ==2116960== ==2116960== ==2116960== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2116960== Open file descriptor 12: ==2116960== at 0xE40A26D: pipe (pipe.c:29) ==2116960== by 0x18AE507D: ??? ==2116960== by 0x12C294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2116960== by 0xE059418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2116960== by 0xDFF2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2116960== by 0xCCC6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2116960== by 0xCB9C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2116960== by 0xCB9C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2116960== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2116960== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2116960== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2116960== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2116960== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2116960== by 0x113935: main (TestCellSrn.cpp:18) ==2116960== ==2116960== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2116960== at 0xE40EC0C: __open_nocancel (open64_nocancel.c:39) ==2116960== by 0xE392BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2116960== by 0xDF50822: ??? ==2116960== by 0xDF5096F: ??? ==2116960== by 0x12CCE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2116960== by 0x12CCE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2116960== by 0x12C84922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2116960== by 0x12C292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2116960== by 0xE059418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2116960== by 0xDFF2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2116960== by 0xCCC6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2116960== by 0xCB9C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2116960== by 0xCB9C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2116960== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2116960== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2116960== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2116960== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2116960== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2116960== by 0x113935: main (TestCellSrn.cpp:18) ==2116960== ==2116960== Open file descriptor 115: ==2116960== ==2116960== ==2116960== Open file descriptor 112: ==2116960== ==2116960== ==2116960== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==2116960== ==2116960== ==2116960== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2116960== ==2116960== ==2116960== ==2116960== HEAP SUMMARY: ==2116960== in use at exit: 858,088 bytes in 12,114 blocks ==2116960== total heap usage: 71,456 allocs, 59,342 frees, 1,543,810,071 bytes allocated ==2116960== ==2116960== LEAK SUMMARY: ==2116960== definitely lost: 0 bytes in 0 blocks ==2116960== indirectly lost: 0 bytes in 0 blocks ==2116960== possibly lost: 0 bytes in 0 blocks ==2116960== still reachable: 120 bytes in 4 blocks ==2116960== suppressed: 857,968 bytes in 12,110 blocks ==2116960== Reachable blocks (those to which a pointer was found) are not shown. ==2116960== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2116960== ==2116960== For lists of detected and suppressed errors, rerun with: -s ==2116960== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)