==2126744== Memcheck, a memory error detector ==2126744== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2126744== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2126744== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==2126744== Parent PID: 2115830 ==2126744== ==2126744== ==2126744== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2126744== Open file descriptor 12: ==2126744== at 0xA1D626D: pipe (pipe.c:29) ==2126744== by 0x1405E07D: ??? ==2126744== by 0xF8044CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2126744== by 0xB8D0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2126744== by 0xB869D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2126744== by 0xA560D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2126744== by 0x9E05153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2126744== by 0x9E051A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2126744== by 0x124280: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2126744== by 0x11DACD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2126744== by 0x1204C0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2126744== by 0x120360: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2126744== by 0x1209F7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2126744== by 0x11BEF5: main (TestHdf5ToVisualizerConverters.cpp:19) ==2126744== ==2126744== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2126744== at 0xA1DAC0C: __open_nocancel (open64_nocancel.c:39) ==2126744== by 0xA15EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2126744== by 0x9E39822: ??? ==2126744== by 0x9E3996F: ??? ==2126744== by 0xF8A96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2126744== by 0xF8A9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2126744== by 0xF85F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2126744== by 0xF8042DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2126744== by 0xB8D0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2126744== by 0xB869D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2126744== by 0xA560D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2126744== by 0x9E05153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2126744== by 0x9E051A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2126744== by 0x124280: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2126744== by 0x11DACD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2126744== by 0x1204C0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2126744== by 0x120360: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2126744== by 0x1209F7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2126744== by 0x11BEF5: main (TestHdf5ToVisualizerConverters.cpp:19) ==2126744== ==2126744== Open file descriptor 115: ==2126744== ==2126744== ==2126744== Open file descriptor 112: ==2126744== ==2126744== ==2126744== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==2126744== ==2126744== ==2126744== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2126744== ==2126744== ==2126744== ==2126744== HEAP SUMMARY: ==2126744== in use at exit: 858,008 bytes in 12,112 blocks ==2126744== total heap usage: 131,530 allocs, 119,418 frees, 1,571,538,261 bytes allocated ==2126744== ==2126744== LEAK SUMMARY: ==2126744== definitely lost: 0 bytes in 0 blocks ==2126744== indirectly lost: 0 bytes in 0 blocks ==2126744== possibly lost: 0 bytes in 0 blocks ==2126744== still reachable: 24 bytes in 2 blocks ==2126744== suppressed: 857,984 bytes in 12,110 blocks ==2126744== Reachable blocks (those to which a pointer was found) are not shown. ==2126744== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2126744== ==2126744== For lists of detected and suppressed errors, rerun with: -s ==2126744== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 21 from 21)