==2124716== Memcheck, a memory error detector ==2124716== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2124716== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2124716== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOffLatticeCryptProjectionSimulation -malloc_debug -malloc_dump -memory_info ==2124716== Parent PID: 2115830 ==2124716== ==2124716== ==2124716== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2124716== Open file descriptor 12: ==2124716== at 0x1168026D: pipe (pipe.c:29) ==2124716== by 0x1A7A207D: ??? ==2124716== by 0x158F34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2124716== by 0x111E6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2124716== by 0x1117FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2124716== by 0xFE53D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2124716== by 0xFD2B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2124716== by 0xFD2B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2124716== by 0x135A21: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2124716== by 0x12F2CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2124716== by 0x131C72: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2124716== by 0x131B12: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2124716== by 0x1321A9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2124716== by 0x12D6F5: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==2124716== ==2124716== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2124716== at 0x11684C0C: __open_nocancel (open64_nocancel.c:39) ==2124716== by 0x11608BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2124716== by 0x110DD822: ??? ==2124716== by 0x110DD96F: ??? ==2124716== by 0x159986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2124716== by 0x15998938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2124716== by 0x1594E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2124716== by 0x158F32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2124716== by 0x111E6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2124716== by 0x1117FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2124716== by 0xFE53D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2124716== by 0xFD2B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2124716== by 0xFD2B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2124716== by 0x135A21: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2124716== by 0x12F2CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2124716== by 0x131C72: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2124716== by 0x131B12: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2124716== by 0x1321A9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2124716== by 0x12D6F5: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==2124716== ==2124716== Open file descriptor 115: ==2124716== ==2124716== ==2124716== Open file descriptor 112: ==2124716== ==2124716== ==2124716== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeCryptProjectionSimulation_valgrind.txt ==2124716== ==2124716== ==2124716== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2124716== ==2124716== ==2124716== ==2124716== HEAP SUMMARY: ==2124716== in use at exit: 858,040 bytes in 12,113 blocks ==2124716== total heap usage: 1,273,185 allocs, 1,261,072 frees, 1,653,697,078 bytes allocated ==2124716== ==2124716== LEAK SUMMARY: ==2124716== definitely lost: 0 bytes in 0 blocks ==2124716== indirectly lost: 0 bytes in 0 blocks ==2124716== possibly lost: 0 bytes in 0 blocks ==2124716== still reachable: 56 bytes in 3 blocks ==2124716== suppressed: 857,984 bytes in 12,110 blocks ==2124716== Reachable blocks (those to which a pointer was found) are not shown. ==2124716== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2124716== ==2124716== For lists of detected and suppressed errors, rerun with: -s ==2124716== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)