==1428449== Memcheck, a memory error detector ==1428449== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1428449== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1428449== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1428449== Parent PID: 1425892 ==1428449== ==1428449== ==1428449== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1428449== Open file descriptor 12: ==1428449== at 0xFDA107D: pipe (pipe.c:29) ==1428449== by 0x196AD07D: ??? ==1428449== by 0x14DD84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1428449== by 0x119FE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1428449== by 0x11997D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1428449== by 0x1068ED38: PetscInitialize (pinit.c:924) ==1428449== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1428449== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1428449== by 0x1D4486: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1428449== by 0x1CDDB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1428449== by 0x1D1554: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1428449== by 0x1D13F4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1428449== by 0x1D1A8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1428449== by 0x1CC1D5: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==1428449== ==1428449== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1428449== at 0xFDA5A1C: __open_nocancel (open64_nocancel.c:39) ==1428449== by 0xFD29BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1428449== by 0xF12F822: ??? ==1428449== by 0xF12F96F: ??? ==1428449== by 0x14E7D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1428449== by 0x14E7D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1428449== by 0x14E33922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1428449== by 0x14DD82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1428449== by 0x119FE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1428449== by 0x11997D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1428449== by 0x1068ED38: PetscInitialize (pinit.c:924) ==1428449== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1428449== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1428449== by 0x1D4486: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1428449== by 0x1CDDB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1428449== by 0x1D1554: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1428449== by 0x1D13F4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1428449== by 0x1D1A8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1428449== by 0x1CC1D5: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==1428449== ==1428449== Open file descriptor 115: ==1428449== ==1428449== ==1428449== Open file descriptor 112: ==1428449== ==1428449== ==1428449== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==1428449== ==1428449== ==1428449== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1428449== ==1428449== ==1428449== ==1428449== HEAP SUMMARY: ==1428449== in use at exit: 995,526 bytes in 13,910 blocks ==1428449== total heap usage: 7,109,069 allocs, 7,095,159 frees, 8,315,280,680 bytes allocated ==1428449== ==1428449== LEAK SUMMARY: ==1428449== definitely lost: 0 bytes in 0 blocks ==1428449== indirectly lost: 0 bytes in 0 blocks ==1428449== possibly lost: 0 bytes in 0 blocks ==1428449== still reachable: 56 bytes in 3 blocks ==1428449== suppressed: 995,470 bytes in 13,907 blocks ==1428449== Reachable blocks (those to which a pointer was found) are not shown. ==1428449== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1428449== ==1428449== For lists of detected and suppressed errors, rerun with: -s ==1428449== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)