==2763779== Memcheck, a memory error detector ==2763779== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2763779== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2763779== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestHdf5Converters -malloc_debug -malloc_dump -memory_info ==2763779== Parent PID: 2762782 ==2763779== ==2763779== ==2763779== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2763779== Open file descriptor 12: ==2763779== at 0x6FBD07D: pipe (pipe.c:29) ==2763779== by 0x1014307D: ??? ==2763779== by 0xC2814CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2763779== by 0x8A33418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2763779== by 0x89CCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2763779== by 0x730CD38: PetscInitialize (pinit.c:924) ==2763779== by 0x6562153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2763779== by 0x65621A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2763779== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2763779== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2763779== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2763779== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2763779== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2763779== by 0x11B235: main (TestHdf5Converters.cpp:18) ==2763779== ==2763779== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2763779== at 0x6FC1A1C: __open_nocancel (open64_nocancel.c:39) ==2763779== by 0x6F45BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2763779== by 0x659C822: ??? ==2763779== by 0x659C96F: ??? ==2763779== by 0xC3266DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2763779== by 0xC326938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2763779== by 0xC2DC922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2763779== by 0xC2812DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2763779== by 0x8A33418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2763779== by 0x89CCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2763779== by 0x730CD38: PetscInitialize (pinit.c:924) ==2763779== by 0x6562153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2763779== by 0x65621A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2763779== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2763779== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2763779== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2763779== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2763779== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2763779== by 0x11B235: main (TestHdf5Converters.cpp:18) ==2763779== ==2763779== Open file descriptor 115: ==2763779== ==2763779== ==2763779== Open file descriptor 112: ==2763779== ==2763779== ==2763779== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5Converters_valgrind.txt ==2763779== ==2763779== ==2763779== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2763779== ==2763779== ==2763779== ==2763779== HEAP SUMMARY: ==2763779== in use at exit: 835,537 bytes in 11,676 blocks ==2763779== total heap usage: 214,881 allocs, 203,205 frees, 1,596,625,498 bytes allocated ==2763779== ==2763779== LEAK SUMMARY: ==2763779== definitely lost: 0 bytes in 0 blocks ==2763779== indirectly lost: 0 bytes in 0 blocks ==2763779== possibly lost: 0 bytes in 0 blocks ==2763779== still reachable: 24 bytes in 2 blocks ==2763779== suppressed: 835,513 bytes in 11,674 blocks ==2763779== Reachable blocks (those to which a pointer was found) are not shown. ==2763779== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2763779== ==2763779== For lists of detected and suppressed errors, rerun with: -s ==2763779== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)