==2778197== Memcheck, a memory error detector ==2778197== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2778197== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2778197== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==2778197== Parent PID: 2762782 ==2778197== ==2778197== ==2778197== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2778197== Open file descriptor 12: ==2778197== at 0xD2A907D: pipe (pipe.c:29) ==2778197== by 0x18A1C07D: ??? ==2778197== by 0x1402D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2778197== by 0x10813418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2778197== by 0x107ACD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2778197== by 0xF4A3D38: PetscInitialize (pinit.c:924) ==2778197== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2778197== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2778197== by 0x124714: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2778197== by 0x11FC2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2778197== by 0x12224E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2778197== by 0x1220EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2778197== by 0x122785: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2778197== by 0x11E055: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==2778197== ==2778197== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2778197== at 0xD2ADA1C: __open_nocancel (open64_nocancel.c:39) ==2778197== by 0xD231BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2778197== by 0xCBDA822: ??? ==2778197== by 0xCBDA96F: ??? ==2778197== by 0x140D26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2778197== by 0x140D2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2778197== by 0x14088922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2778197== by 0x1402D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2778197== by 0x10813418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2778197== by 0x107ACD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2778197== by 0xF4A3D38: PetscInitialize (pinit.c:924) ==2778197== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2778197== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2778197== by 0x124714: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2778197== by 0x11FC2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2778197== by 0x12224E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2778197== by 0x1220EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2778197== by 0x122785: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2778197== by 0x11E055: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==2778197== ==2778197== Open file descriptor 115: ==2778197== ==2778197== ==2778197== Open file descriptor 112: ==2778197== ==2778197== ==2778197== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==2778197== ==2778197== ==2778197== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2778197== ==2778197== ==2778197== ==2778197== HEAP SUMMARY: ==2778197== in use at exit: 835,564 bytes in 11,673 blocks ==2778197== total heap usage: 40,694,749 allocs, 40,683,076 frees, 4,032,187,165 bytes allocated ==2778197== ==2778197== LEAK SUMMARY: ==2778197== definitely lost: 0 bytes in 0 blocks ==2778197== indirectly lost: 0 bytes in 0 blocks ==2778197== possibly lost: 0 bytes in 0 blocks ==2778197== still reachable: 56 bytes in 3 blocks ==2778197== suppressed: 835,508 bytes in 11,670 blocks ==2778197== Reachable blocks (those to which a pointer was found) are not shown. ==2778197== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2778197== ==2778197== For lists of detected and suppressed errors, rerun with: -s ==2778197== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)