==2814463== Memcheck, a memory error detector ==2814463== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2814463== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2814463== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==2814463== Parent PID: 2798721 ==2814463== ==2814463== ==2814463== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2814463== Open file descriptor 12: ==2814463== at 0x10BA307D: pipe (pipe.c:29) ==2814463== by 0x1B36F07D: ??? ==2814463== by 0x1551D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2814463== by 0x104AB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2814463== by 0x10444D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2814463== by 0xF13BD38: PetscInitialize (pinit.c:924) ==2814463== by 0xEFA22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2814463== by 0xEFA232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2814463== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2814463== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2814463== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2814463== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2814463== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2814463== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==2814463== ==2814463== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2814463== at 0x10BA7A1C: __open_nocancel (open64_nocancel.c:39) ==2814463== by 0x10B2BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2814463== by 0xEFDD822: ??? ==2814463== by 0xEFDD96F: ??? ==2814463== by 0x155C26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2814463== by 0x155C2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2814463== by 0x15578922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2814463== by 0x1551D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2814463== by 0x104AB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2814463== by 0x10444D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2814463== by 0xF13BD38: PetscInitialize (pinit.c:924) ==2814463== by 0xEFA22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2814463== by 0xEFA232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2814463== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2814463== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2814463== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2814463== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2814463== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2814463== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==2814463== ==2814463== Open file descriptor 115: ==2814463== ==2814463== ==2814463== Open file descriptor 112: ==2814463== ==2814463== ==2814463== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==2814463== ==2814463== ==2814463== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2814463== ==2814463== ==2814463== ==2814463== HEAP SUMMARY: ==2814463== in use at exit: 835,713 bytes in 11,678 blocks ==2814463== total heap usage: 870,408 allocs, 858,730 frees, 1,662,657,777 bytes allocated ==2814463== ==2814463== LEAK SUMMARY: ==2814463== definitely lost: 0 bytes in 0 blocks ==2814463== indirectly lost: 0 bytes in 0 blocks ==2814463== possibly lost: 0 bytes in 0 blocks ==2814463== still reachable: 120 bytes in 4 blocks ==2814463== suppressed: 835,593 bytes in 11,674 blocks ==2814463== Reachable blocks (those to which a pointer was found) are not shown. ==2814463== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2814463== ==2814463== For lists of detected and suppressed errors, rerun with: -s ==2814463== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)