==2800011== Memcheck, a memory error detector ==2800011== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2800011== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2800011== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==2800011== Parent PID: 2798721 ==2800011== ==2800011== ==2800011== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2800011== Open file descriptor 12: ==2800011== at 0xEF9E07D: pipe (pipe.c:29) ==2800011== by 0x196AC07D: ??? ==2800011== by 0x13C5B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2800011== by 0xEBEB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2800011== by 0xEB84D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2800011== by 0xD87BD38: PetscInitialize (pinit.c:924) ==2800011== by 0xD6E22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2800011== by 0xD6E232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2800011== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2800011== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2800011== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2800011== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2800011== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2800011== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==2800011== ==2800011== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2800011== at 0xEFA2A1C: __open_nocancel (open64_nocancel.c:39) ==2800011== by 0xEF26BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2800011== by 0xD71D822: ??? ==2800011== by 0xD71D96F: ??? ==2800011== by 0x13D006DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2800011== by 0x13D00938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2800011== by 0x13CB6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2800011== by 0x13C5B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2800011== by 0xEBEB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2800011== by 0xEB84D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2800011== by 0xD87BD38: PetscInitialize (pinit.c:924) ==2800011== by 0xD6E22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2800011== by 0xD6E232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2800011== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2800011== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2800011== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2800011== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2800011== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2800011== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==2800011== ==2800011== Open file descriptor 115: ==2800011== ==2800011== ==2800011== Open file descriptor 112: ==2800011== ==2800011== ==2800011== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==2800011== ==2800011== ==2800011== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2800011== ==2800011== ==2800011== ==2800011== HEAP SUMMARY: ==2800011== in use at exit: 835,580 bytes in 11,674 blocks ==2800011== total heap usage: 4,187,700 allocs, 4,176,026 frees, 1,971,821,467 bytes allocated ==2800011== ==2800011== LEAK SUMMARY: ==2800011== definitely lost: 0 bytes in 0 blocks ==2800011== indirectly lost: 0 bytes in 0 blocks ==2800011== possibly lost: 0 bytes in 0 blocks ==2800011== still reachable: 72 bytes in 4 blocks ==2800011== suppressed: 835,508 bytes in 11,670 blocks ==2800011== Reachable blocks (those to which a pointer was found) are not shown. ==2800011== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2800011== ==2800011== For lists of detected and suppressed errors, rerun with: -s ==2800011== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 32 from 32)