==1490189== Memcheck, a memory error detector ==1490189== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1490189== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1490189== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==1490189== Parent PID: 1488630 ==1490189== ==1490189== ==1490189== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1490189== Open file descriptor 12: ==1490189== at 0xD2E307D: pipe (pipe.c:29) ==1490189== by 0x18A1D07D: ??? ==1490189== by 0x1402B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1490189== by 0x1080B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1490189== by 0x107A4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1490189== by 0xF49BD38: PetscInitialize (pinit.c:924) ==1490189== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1490189== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1490189== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1490189== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1490189== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1490189== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1490189== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1490189== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==1490189== ==1490189== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1490189== at 0xD2E7A1C: __open_nocancel (open64_nocancel.c:39) ==1490189== by 0xD26BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1490189== by 0xCBD4822: ??? ==1490189== by 0xCBD496F: ??? ==1490189== by 0x140D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1490189== by 0x140D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1490189== by 0x14086922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1490189== by 0x1402B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1490189== by 0x1080B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1490189== by 0x107A4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1490189== by 0xF49BD38: PetscInitialize (pinit.c:924) ==1490189== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1490189== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1490189== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1490189== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1490189== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1490189== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1490189== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1490189== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==1490189== ==1490189== Open file descriptor 115: ==1490189== ==1490189== ==1490189== Open file descriptor 112: ==1490189== ==1490189== ==1490189== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==1490189== ==1490189== ==1490189== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1490189== ==1490189== ==1490189== ==1490189== HEAP SUMMARY: ==1490189== in use at exit: 995,585 bytes in 13,914 blocks ==1490189== total heap usage: 67,857 allocs, 53,943 frees, 1,572,214,533 bytes allocated ==1490189== ==1490189== LEAK SUMMARY: ==1490189== definitely lost: 0 bytes in 0 blocks ==1490189== indirectly lost: 0 bytes in 0 blocks ==1490189== possibly lost: 0 bytes in 0 blocks ==1490189== still reachable: 56 bytes in 3 blocks ==1490189== suppressed: 995,529 bytes in 13,911 blocks ==1490189== Reachable blocks (those to which a pointer was found) are not shown. ==1490189== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1490189== ==1490189== For lists of detected and suppressed errors, rerun with: -s ==1490189== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)