==1504328== Memcheck, a memory error detector ==1504328== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1504328== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1504328== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulationBoundaryCondition -malloc_debug -malloc_dump -memory_info ==1504328== Parent PID: 1488630 ==1504328== ==1504328== ==1504328== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1504328== Open file descriptor 12: ==1504328== at 0x1192307D: pipe (pipe.c:29) ==1504328== by 0x1A6DF07D: ??? ==1504328== by 0x158524CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1504328== by 0x1122B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1504328== by 0x111C4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1504328== by 0xFEBBD38: PetscInitialize (pinit.c:924) ==1504328== by 0xFD2B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1504328== by 0xFD2B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1504328== by 0x14364B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1504328== by 0x13C4E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1504328== by 0x13F2A4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1504328== by 0x13F19F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1504328== by 0x13F7B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1504328== by 0x13ACE5: main (TestCryptSimulationBoundaryCondition.cpp:18) ==1504328== ==1504328== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1504328== at 0x11927A1C: __open_nocancel (open64_nocancel.c:39) ==1504328== by 0x118ABBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1504328== by 0xFD5F822: ??? ==1504328== by 0xFD5F96F: ??? ==1504328== by 0x158F76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1504328== by 0x158F7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1504328== by 0x158AD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1504328== by 0x158522DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1504328== by 0x1122B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1504328== by 0x111C4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1504328== by 0xFEBBD38: PetscInitialize (pinit.c:924) ==1504328== by 0xFD2B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1504328== by 0xFD2B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1504328== by 0x14364B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1504328== by 0x13C4E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1504328== by 0x13F2A4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1504328== by 0x13F19F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1504328== by 0x13F7B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1504328== by 0x13ACE5: main (TestCryptSimulationBoundaryCondition.cpp:18) ==1504328== ==1504328== Open file descriptor 115: ==1504328== ==1504328== ==1504328== Open file descriptor 112: ==1504328== ==1504328== ==1504328== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulationBoundaryCondition_valgrind.txt ==1504328== ==1504328== ==1504328== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1504328== ==1504328== ==1504328== ==1504328== HEAP SUMMARY: ==1504328== in use at exit: 995,681 bytes in 13,915 blocks ==1504328== total heap usage: 82,131 allocs, 68,216 frees, 1,576,055,346 bytes allocated ==1504328== ==1504328== LEAK SUMMARY: ==1504328== definitely lost: 0 bytes in 0 blocks ==1504328== indirectly lost: 0 bytes in 0 blocks ==1504328== possibly lost: 0 bytes in 0 blocks ==1504328== still reachable: 136 bytes in 4 blocks ==1504328== suppressed: 995,545 bytes in 13,911 blocks ==1504328== Reachable blocks (those to which a pointer was found) are not shown. ==1504328== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1504328== ==1504328== For lists of detected and suppressed errors, rerun with: -s ==1504328== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)