==1490517== Memcheck, a memory error detector ==1490517== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1490517== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1490517== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithBuskeForces -malloc_debug -malloc_dump -memory_info ==1490517== Parent PID: 1488630 ==1490517== ==1490517== ==1490517== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1490517== Open file descriptor 12: ==1490517== at 0xEC5107D: pipe (pipe.c:29) ==1490517== by 0x18A1D07D: ??? ==1490517== by 0x140244CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1490517== by 0x108F2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1490517== by 0x1088BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1490517== by 0xF582D38: PetscInitialize (pinit.c:924) ==1490517== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1490517== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1490517== by 0x1241FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1490517== by 0x11F593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1490517== by 0x121AD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1490517== by 0x1219D3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1490517== by 0x121FE7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1490517== by 0x11DD95: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==1490517== ==1490517== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1490517== at 0xEC55A1C: __open_nocancel (open64_nocancel.c:39) ==1490517== by 0xEBD9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1490517== by 0xE49F822: ??? ==1490517== by 0xE49F96F: ??? ==1490517== by 0x140C96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1490517== by 0x140C9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1490517== by 0x1407F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1490517== by 0x140242DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1490517== by 0x108F2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1490517== by 0x1088BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1490517== by 0xF582D38: PetscInitialize (pinit.c:924) ==1490517== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1490517== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1490517== by 0x1241FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1490517== by 0x11F593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1490517== by 0x121AD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1490517== by 0x1219D3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1490517== by 0x121FE7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1490517== by 0x11DD95: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==1490517== ==1490517== Open file descriptor 115: ==1490517== ==1490517== ==1490517== Open file descriptor 112: ==1490517== ==1490517== ==1490517== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithBuskeForces_valgrind.txt ==1490517== ==1490517== ==1490517== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1490517== ==1490517== ==1490517== ==1490517== HEAP SUMMARY: ==1490517== in use at exit: 995,526 bytes in 13,910 blocks ==1490517== total heap usage: 3,605,667 allocs, 3,591,757 frees, 4,714,561,694 bytes allocated ==1490517== ==1490517== LEAK SUMMARY: ==1490517== definitely lost: 0 bytes in 0 blocks ==1490517== indirectly lost: 0 bytes in 0 blocks ==1490517== possibly lost: 0 bytes in 0 blocks ==1490517== still reachable: 56 bytes in 3 blocks ==1490517== suppressed: 995,470 bytes in 13,907 blocks ==1490517== Reachable blocks (those to which a pointer was found) are not shown. ==1490517== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1490517== ==1490517== For lists of detected and suppressed errors, rerun with: -s ==1490517== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)