==1488790== Memcheck, a memory error detector ==1488790== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1488790== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1488790== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestPetscSetup -malloc_debug -malloc_dump -memory_info ==1488790== Parent PID: 1488630 ==1488790== ==1488790== ==1488790== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1488790== Open file descriptor 12: ==1488790== at 0x603407D: pipe (pipe.c:29) ==1488790== by 0xAEA607D: ??? ==1488790== by 0x89BE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1488790== by 0x6271418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1488790== by 0x620AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1488790== by 0x4A22D38: PetscInitialize (pinit.c:924) ==1488790== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1488790== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1488790== by 0x113E58: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1488790== by 0x10F48D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1488790== by 0x111EFA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1488790== by 0x111D9A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1488790== by 0x112431: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1488790== by 0x10D8B5: main (TestPetscSetup.cpp:19) ==1488790== ==1488790== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1488790== at 0x6038A1C: __open_nocancel (open64_nocancel.c:39) ==1488790== by 0x5FBCBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1488790== by 0x5CAC822: ??? ==1488790== by 0x5CAC96F: ??? ==1488790== by 0x8A636DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1488790== by 0x8A63938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1488790== by 0x8A19922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1488790== by 0x89BE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1488790== by 0x6271418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1488790== by 0x620AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1488790== by 0x4A22D38: PetscInitialize (pinit.c:924) ==1488790== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1488790== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1488790== by 0x113E58: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1488790== by 0x10F48D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1488790== by 0x111EFA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1488790== by 0x111D9A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1488790== by 0x112431: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1488790== by 0x10D8B5: main (TestPetscSetup.cpp:19) ==1488790== ==1488790== Open file descriptor 115: ==1488790== ==1488790== ==1488790== Open file descriptor 112: ==1488790== ==1488790== ==1488790== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPetscSetup_valgrind.txt ==1488790== ==1488790== ==1488790== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1488790== ==1488790== ==1488790== ==1488790== HEAP SUMMARY: ==1488790== in use at exit: 995,073 bytes in 13,913 blocks ==1488790== total heap usage: 57,910 allocs, 43,997 frees, 1,571,294,446 bytes allocated ==1488790== ==1488790== LEAK SUMMARY: ==1488790== definitely lost: 0 bytes in 0 blocks ==1488790== indirectly lost: 0 bytes in 0 blocks ==1488790== possibly lost: 0 bytes in 0 blocks ==1488790== still reachable: 24 bytes in 2 blocks ==1488790== suppressed: 995,049 bytes in 13,911 blocks ==1488790== Reachable blocks (those to which a pointer was found) are not shown. ==1488790== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1488790== ==1488790== For lists of detected and suppressed errors, rerun with: -s ==1488790== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)