==1490073== Memcheck, a memory error detector ==1490073== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1490073== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1490073== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsMeshReader -malloc_debug -malloc_dump -memory_info ==1490073== Parent PID: 1488630 ==1490073== ==1490073== ==1490073== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1490073== Open file descriptor 12: ==1490073== at 0xE82507D: pipe (pipe.c:29) ==1490073== by 0x18A1D07D: ??? ==1490073== by 0x13FD74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1490073== by 0x104C4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1490073== by 0x1045DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1490073== by 0xF154D38: PetscInitialize (pinit.c:924) ==1490073== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1490073== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1490073== by 0x118F5E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1490073== by 0x11450D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1490073== by 0x116FE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1490073== by 0x116E80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1490073== by 0x117517: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1490073== by 0x112935: main (TestPottsMeshReader.cpp:19) ==1490073== ==1490073== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1490073== at 0xE829A1C: __open_nocancel (open64_nocancel.c:39) ==1490073== by 0xE7ADBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1490073== by 0xE49F822: ??? ==1490073== by 0xE49F96F: ??? ==1490073== by 0x1407C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1490073== by 0x1407C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1490073== by 0x14032922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1490073== by 0x13FD72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1490073== by 0x104C4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1490073== by 0x1045DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1490073== by 0xF154D38: PetscInitialize (pinit.c:924) ==1490073== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1490073== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1490073== by 0x118F5E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1490073== by 0x11450D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1490073== by 0x116FE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1490073== by 0x116E80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1490073== by 0x117517: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1490073== by 0x112935: main (TestPottsMeshReader.cpp:19) ==1490073== ==1490073== Open file descriptor 115: ==1490073== ==1490073== ==1490073== Open file descriptor 112: ==1490073== ==1490073== ==1490073== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsMeshReader_valgrind.txt ==1490073== ==1490073== ==1490073== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1490073== ==1490073== ==1490073== ==1490073== HEAP SUMMARY: ==1490073== in use at exit: 995,553 bytes in 13,913 blocks ==1490073== total heap usage: 65,496 allocs, 51,583 frees, 1,572,184,299 bytes allocated ==1490073== ==1490073== LEAK SUMMARY: ==1490073== definitely lost: 0 bytes in 0 blocks ==1490073== indirectly lost: 0 bytes in 0 blocks ==1490073== possibly lost: 0 bytes in 0 blocks ==1490073== still reachable: 24 bytes in 2 blocks ==1490073== suppressed: 995,529 bytes in 13,911 blocks ==1490073== Reachable blocks (those to which a pointer was found) are not shown. ==1490073== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1490073== ==1490073== For lists of detected and suppressed errors, rerun with: -s ==1490073== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)