==2892429== Memcheck, a memory error detector ==2892429== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2892429== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2892429== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==2892429== Parent PID: 2876088 ==2892429== ==2892429== ==2892429== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2892429== Open file descriptor 12: ==2892429== at 0xA60407D: pipe (pipe.c:29) ==2892429== by 0x13F9507D: ??? ==2892429== by 0xD6404CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2892429== by 0x9EF2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2892429== by 0x9E8BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2892429== by 0xA98FD38: PetscInitialize (pinit.c:924) ==2892429== by 0x9DAA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2892429== by 0x9DAA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2892429== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2892429== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2892429== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2892429== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2892429== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2892429== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==2892429== ==2892429== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2892429== at 0xA608A1C: __open_nocancel (open64_nocancel.c:39) ==2892429== by 0xA58CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2892429== by 0x9DE4822: ??? ==2892429== by 0x9DE496F: ??? ==2892429== by 0xC5C86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2892429== by 0xC5C8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2892429== by 0xC57E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2892429== by 0xD6402DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2892429== by 0x9EF2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2892429== by 0x9E8BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2892429== by 0xA98FD38: PetscInitialize (pinit.c:924) ==2892429== by 0x9DAA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2892429== by 0x9DAA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2892429== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2892429== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2892429== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2892429== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2892429== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2892429== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==2892429== ==2892429== Open file descriptor 115: ==2892429== ==2892429== ==2892429== Open file descriptor 112: ==2892429== ==2892429== ==2892429== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==2892429== ==2892429== ==2892429== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2892429== ==2892429== ==2892429== ==2892429== HEAP SUMMARY: ==2892429== in use at exit: 836,028 bytes in 11,682 blocks ==2892429== total heap usage: 2,381,533 allocs, 2,369,851 frees, 2,670,163,829 bytes allocated ==2892429== ==2892429== LEAK SUMMARY: ==2892429== definitely lost: 0 bytes in 0 blocks ==2892429== indirectly lost: 0 bytes in 0 blocks ==2892429== possibly lost: 0 bytes in 0 blocks ==2892429== still reachable: 24 bytes in 2 blocks ==2892429== suppressed: 836,004 bytes in 11,680 blocks ==2892429== Reachable blocks (those to which a pointer was found) are not shown. ==2892429== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2892429== ==2892429== For lists of detected and suppressed errors, rerun with: -s ==2892429== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 34)