==1561343== Memcheck, a memory error detector ==1561343== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1561343== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1561343== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==1561343== Parent PID: 1544859 ==1561343== ==1561343== ==1561343== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1561343== Open file descriptor 12: ==1561343== at 0xBD5B07D: pipe (pipe.c:29) ==1561343== by 0x13F9607D: ??? ==1561343== by 0xF7514CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1561343== by 0xB649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1561343== by 0xB5E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1561343== by 0xA2D9D38: PetscInitialize (pinit.c:924) ==1561343== by 0xA147153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1561343== by 0xA1471A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1561343== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1561343== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1561343== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1561343== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1561343== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1561343== by 0x138285: main (TestBidomainProblem.cpp:19) ==1561343== ==1561343== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1561343== at 0xBD5FA1C: __open_nocancel (open64_nocancel.c:39) ==1561343== by 0xBCE3BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1561343== by 0xA17B822: ??? ==1561343== by 0xA17B96F: ??? ==1561343== by 0xF7F66DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1561343== by 0xF7F6938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1561343== by 0xF7AC922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1561343== by 0xF7512DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1561343== by 0xB649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1561343== by 0xB5E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1561343== by 0xA2D9D38: PetscInitialize (pinit.c:924) ==1561343== by 0xA147153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1561343== by 0xA1471A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1561343== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1561343== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1561343== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1561343== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1561343== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1561343== by 0x138285: main (TestBidomainProblem.cpp:19) ==1561343== ==1561343== Open file descriptor 115: ==1561343== ==1561343== ==1561343== Open file descriptor 112: ==1561343== ==1561343== ==1561343== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==1561343== ==1561343== ==1561343== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1561343== ==1561343== ==1561343== ==1561343== HEAP SUMMARY: ==1561343== in use at exit: 996,049 bytes in 13,923 blocks ==1561343== total heap usage: 599,125 allocs, 585,202 frees, 1,782,742,740 bytes allocated ==1561343== ==1561343== LEAK SUMMARY: ==1561343== definitely lost: 0 bytes in 0 blocks ==1561343== indirectly lost: 0 bytes in 0 blocks ==1561343== possibly lost: 0 bytes in 0 blocks ==1561343== still reachable: 24 bytes in 2 blocks ==1561343== suppressed: 996,025 bytes in 13,921 blocks ==1561343== Reachable blocks (those to which a pointer was found) are not shown. ==1561343== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1561343== ==1561343== For lists of detected and suppressed errors, rerun with: -s ==1561343== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 103 from 38)