==1563373== Memcheck, a memory error detector ==1563373== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1563373== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1563373== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==1563373== Parent PID: 1544859 ==1563373== ==1563373== ==1563373== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1563373== Open file descriptor 12: ==1563373== at 0xA43607D: pipe (pipe.c:29) ==1563373== by 0x13F9607D: ??? ==1563373== by 0xF79E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1563373== by 0xBB2F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1563373== by 0xBAC8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1563373== by 0xA7BFD38: PetscInitialize (pinit.c:924) ==1563373== by 0x9D1B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1563373== by 0x9D1B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1563373== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1563373== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1563373== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1563373== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1563373== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1563373== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==1563373== ==1563373== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1563373== at 0xA43AA1C: __open_nocancel (open64_nocancel.c:39) ==1563373== by 0xA3BEBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1563373== by 0x9D4F822: ??? ==1563373== by 0x9D4F96F: ??? ==1563373== by 0xF8436DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1563373== by 0xF843938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1563373== by 0xF7F9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1563373== by 0xF79E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1563373== by 0xBB2F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1563373== by 0xBAC8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1563373== by 0xA7BFD38: PetscInitialize (pinit.c:924) ==1563373== by 0x9D1B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1563373== by 0x9D1B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1563373== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1563373== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1563373== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1563373== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1563373== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1563373== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==1563373== ==1563373== Open file descriptor 115: ==1563373== ==1563373== ==1563373== Open file descriptor 112: ==1563373== ==1563373== ==1563373== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==1563373== ==1563373== ==1563373== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1563373== ==1563373== ==1563373== ==1563373== HEAP SUMMARY: ==1563373== in use at exit: 995,990 bytes in 13,919 blocks ==1563373== total heap usage: 847,691 allocs, 833,772 frees, 1,676,820,771 bytes allocated ==1563373== ==1563373== LEAK SUMMARY: ==1563373== definitely lost: 0 bytes in 0 blocks ==1563373== indirectly lost: 0 bytes in 0 blocks ==1563373== possibly lost: 0 bytes in 0 blocks ==1563373== still reachable: 24 bytes in 2 blocks ==1563373== suppressed: 995,966 bytes in 13,917 blocks ==1563373== Reachable blocks (those to which a pointer was found) are not shown. ==1563373== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1563373== ==1563373== For lists of detected and suppressed errors, rerun with: -s ==1563373== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 60 from 34)