==1559621== Memcheck, a memory error detector ==1559621== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1559621== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1559621== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellMutationStateTutorial -malloc_debug -malloc_dump -memory_info ==1559621== Parent PID: 1544859 ==1559621== ==1559621== ==1559621== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1559621== Open file descriptor 12: ==1559621== at 0x1006307D: pipe (pipe.c:29) ==1559621== by 0x18A1D07D: ??? ==1559621== by 0x13F844CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1559621== by 0xF96B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1559621== by 0xF904D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1559621== by 0xE5FBD38: PetscInitialize (pinit.c:924) ==1559621== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1559621== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1559621== by 0x149987: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1559621== by 0x1442D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1559621== by 0x146FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1559621== by 0x146E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1559621== by 0x147509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1559621== by 0x1426F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==1559621== ==1559621== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1559621== at 0x10067A1C: __open_nocancel (open64_nocancel.c:39) ==1559621== by 0xFFEBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1559621== by 0xE49F822: ??? ==1559621== by 0xE49F96F: ??? ==1559621== by 0x1402B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1559621== by 0x1402B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1559621== by 0x13FE1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1559621== by 0x13F842DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1559621== by 0xF96B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1559621== by 0xF904D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1559621== by 0xE5FBD38: PetscInitialize (pinit.c:924) ==1559621== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1559621== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1559621== by 0x149987: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1559621== by 0x1442D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1559621== by 0x146FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1559621== by 0x146E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1559621== by 0x147509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1559621== by 0x1426F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==1559621== ==1559621== Open file descriptor 115: ==1559621== ==1559621== ==1559621== Open file descriptor 112: ==1559621== ==1559621== ==1559621== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellMutationStateTutorial_valgrind.txt ==1559621== ==1559621== ==1559621== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1559621== ==1559621== ==1559621== ==1559621== HEAP SUMMARY: ==1559621== in use at exit: 995,526 bytes in 13,910 blocks ==1559621== total heap usage: 4,275,145 allocs, 4,261,235 frees, 2,131,599,504 bytes allocated ==1559621== ==1559621== LEAK SUMMARY: ==1559621== definitely lost: 0 bytes in 0 blocks ==1559621== indirectly lost: 0 bytes in 0 blocks ==1559621== possibly lost: 0 bytes in 0 blocks ==1559621== still reachable: 56 bytes in 3 blocks ==1559621== suppressed: 995,470 bytes in 13,907 blocks ==1559621== Reachable blocks (those to which a pointer was found) are not shown. ==1559621== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1559621== ==1559621== For lists of detected and suppressed errors, rerun with: -s ==1559621== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)