==1546683== Memcheck, a memory error detector ==1546683== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1546683== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1546683== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestDeltaNotchModifier -malloc_debug -malloc_dump -memory_info ==1546683== Parent PID: 1544859 ==1546683== ==1546683== ==1546683== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1546683== Open file descriptor 12: ==1546683== at 0xEBAC07D: pipe (pipe.c:29) ==1546683== by 0x18A1D07D: ??? ==1546683== by 0x140244CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1546683== by 0x1080B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1546683== by 0x107A4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1546683== by 0xF499D38: PetscInitialize (pinit.c:924) ==1546683== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1546683== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1546683== by 0x208508: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1546683== by 0x1FFF99: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1546683== by 0x203992: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1546683== by 0x203832: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1546683== by 0x203EC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1546683== by 0x1FE3B5: main (TestDeltaNotchModifier.cpp:19) ==1546683== ==1546683== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1546683== at 0xEBB0A1C: __open_nocancel (open64_nocancel.c:39) ==1546683== by 0xEB34BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1546683== by 0xE49F822: ??? ==1546683== by 0xE49F96F: ??? ==1546683== by 0x140C96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1546683== by 0x140C9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1546683== by 0x1407F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1546683== by 0x140242DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1546683== by 0x1080B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1546683== by 0x107A4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1546683== by 0xF499D38: PetscInitialize (pinit.c:924) ==1546683== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1546683== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1546683== by 0x208508: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1546683== by 0x1FFF99: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1546683== by 0x203992: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1546683== by 0x203832: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1546683== by 0x203EC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1546683== by 0x1FE3B5: main (TestDeltaNotchModifier.cpp:19) ==1546683== ==1546683== Open file descriptor 115: ==1546683== ==1546683== ==1546683== Open file descriptor 112: ==1546683== ==1546683== ==1546683== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestDeltaNotchModifier_valgrind.txt ==1546683== ==1546683== ==1546683== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1546683== ==1546683== ==1546683== ==1546683== HEAP SUMMARY: ==1546683== in use at exit: 995,526 bytes in 13,910 blocks ==1546683== total heap usage: 5,570,312 allocs, 5,556,402 frees, 9,120,827,513 bytes allocated ==1546683== ==1546683== LEAK SUMMARY: ==1546683== definitely lost: 0 bytes in 0 blocks ==1546683== indirectly lost: 0 bytes in 0 blocks ==1546683== possibly lost: 0 bytes in 0 blocks ==1546683== still reachable: 56 bytes in 3 blocks ==1546683== suppressed: 995,470 bytes in 13,907 blocks ==1546683== Reachable blocks (those to which a pointer was found) are not shown. ==1546683== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1546683== ==1546683== For lists of detected and suppressed errors, rerun with: -s ==1546683== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)