==1545875== Memcheck, a memory error detector ==1545875== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1545875== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1545875== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestHdf5Converters -malloc_debug -malloc_dump -memory_info ==1545875== Parent PID: 1544859 ==1545875== ==1545875== ==1545875== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1545875== Open file descriptor 12: ==1545875== at 0x6FB507D: pipe (pipe.c:29) ==1545875== by 0x1014507D: ??? ==1545875== by 0xC2794CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1545875== by 0x8A2B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1545875== by 0x89C4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1545875== by 0x7304D38: PetscInitialize (pinit.c:924) ==1545875== by 0x6562153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1545875== by 0x65621A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1545875== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1545875== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1545875== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1545875== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1545875== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1545875== by 0x11B235: main (TestHdf5Converters.cpp:18) ==1545875== ==1545875== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1545875== at 0x6FB9A1C: __open_nocancel (open64_nocancel.c:39) ==1545875== by 0x6F3DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1545875== by 0x6596822: ??? ==1545875== by 0x659696F: ??? ==1545875== by 0xC31E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1545875== by 0xC31E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1545875== by 0xC2D4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1545875== by 0xC2792DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1545875== by 0x8A2B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1545875== by 0x89C4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1545875== by 0x7304D38: PetscInitialize (pinit.c:924) ==1545875== by 0x6562153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1545875== by 0x65621A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1545875== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1545875== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1545875== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1545875== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1545875== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1545875== by 0x11B235: main (TestHdf5Converters.cpp:18) ==1545875== ==1545875== Open file descriptor 115: ==1545875== ==1545875== ==1545875== Open file descriptor 112: ==1545875== ==1545875== ==1545875== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5Converters_valgrind.txt ==1545875== ==1545875== ==1545875== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1545875== ==1545875== ==1545875== ==1545875== HEAP SUMMARY: ==1545875== in use at exit: 995,489 bytes in 13,913 blocks ==1545875== total heap usage: 219,139 allocs, 205,226 frees, 1,627,959,514 bytes allocated ==1545875== ==1545875== LEAK SUMMARY: ==1545875== definitely lost: 0 bytes in 0 blocks ==1545875== indirectly lost: 0 bytes in 0 blocks ==1545875== possibly lost: 0 bytes in 0 blocks ==1545875== still reachable: 24 bytes in 2 blocks ==1545875== suppressed: 995,465 bytes in 13,911 blocks ==1545875== Reachable blocks (those to which a pointer was found) are not shown. ==1545875== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1545875== ==1545875== For lists of detected and suppressed errors, rerun with: -s ==1545875== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)