==1546639== Memcheck, a memory error detector ==1546639== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1546639== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1546639== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==1546639== Parent PID: 1544859 ==1546639== ==1546639== ==1546639== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1546639== Open file descriptor 12: ==1546639== at 0xE79A07D: pipe (pipe.c:29) ==1546639== by 0x18A1E07D: ??? ==1546639== by 0x12F724CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1546639== by 0xE0A2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1546639== by 0xE03BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1546639== by 0xCD32D38: PetscInitialize (pinit.c:924) ==1546639== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1546639== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1546639== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1546639== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1546639== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1546639== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1546639== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1546639== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==1546639== ==1546639== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1546639== at 0xE79EA1C: __open_nocancel (open64_nocancel.c:39) ==1546639== by 0xE722BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1546639== by 0xCBD4822: ??? ==1546639== by 0xCBD496F: ??? ==1546639== by 0x130176DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1546639== by 0x13017938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1546639== by 0x12FCD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1546639== by 0x12F722DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1546639== by 0xE0A2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1546639== by 0xE03BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1546639== by 0xCD32D38: PetscInitialize (pinit.c:924) ==1546639== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1546639== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1546639== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1546639== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1546639== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1546639== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1546639== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1546639== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==1546639== ==1546639== Open file descriptor 115: ==1546639== ==1546639== ==1546639== Open file descriptor 112: ==1546639== ==1546639== ==1546639== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==1546639== ==1546639== ==1546639== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1546639== ==1546639== ==1546639== ==1546639== HEAP SUMMARY: ==1546639== in use at exit: 995,585 bytes in 13,914 blocks ==1546639== total heap usage: 79,636 allocs, 65,722 frees, 1,573,008,082 bytes allocated ==1546639== ==1546639== LEAK SUMMARY: ==1546639== definitely lost: 0 bytes in 0 blocks ==1546639== indirectly lost: 0 bytes in 0 blocks ==1546639== possibly lost: 0 bytes in 0 blocks ==1546639== still reachable: 56 bytes in 3 blocks ==1546639== suppressed: 995,529 bytes in 13,911 blocks ==1546639== Reachable blocks (those to which a pointer was found) are not shown. ==1546639== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1546639== ==1546639== For lists of detected and suppressed errors, rerun with: -s ==1546639== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)