==2286714== Memcheck, a memory error detector ==2286714== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2286714== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2286714== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==2286714== Parent PID: 2277183 ==2286714== ==2286714== ==2286714== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2286714== Open file descriptor 12: ==2286714== at 0xA64526D: pipe (pipe.c:29) ==2286714== by 0x143EE07D: ??? ==2286714== by 0xDA2E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2286714== by 0xA278418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2286714== by 0xA211D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2286714== by 0xA9CDD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2286714== by 0xA13A2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2286714== by 0xA13A32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2286714== by 0x124860: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2286714== by 0x11F973: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2286714== by 0x122578: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2286714== by 0x122473: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2286714== by 0x122A87: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2286714== by 0x11E175: main (TestExtendedBidomainProblem.cpp:18) ==2286714== ==2286714== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2286714== at 0xA649C0C: __open_nocancel (open64_nocancel.c:39) ==2286714== by 0xA5CDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2286714== by 0xA16F822: ??? ==2286714== by 0xA16F96F: ??? ==2286714== by 0xDAD36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2286714== by 0xDAD3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2286714== by 0xDA89922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2286714== by 0xDA2E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2286714== by 0xA278418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2286714== by 0xA211D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2286714== by 0xA9CDD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2286714== by 0xA13A2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2286714== by 0xA13A32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2286714== by 0x124860: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2286714== by 0x11F973: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2286714== by 0x122578: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2286714== by 0x122473: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2286714== by 0x122A87: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2286714== by 0x11E175: main (TestExtendedBidomainProblem.cpp:18) ==2286714== ==2286714== Open file descriptor 115: ==2286714== ==2286714== ==2286714== Open file descriptor 112: ==2286714== ==2286714== ==2286714== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==2286714== ==2286714== ==2286714== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2286714== ==2286714== ==2286714== ==2286714== HEAP SUMMARY: ==2286714== in use at exit: 858,425 bytes in 12,118 blocks ==2286714== total heap usage: 2,381,939 allocs, 2,369,821 frees, 2,672,907,523 bytes allocated ==2286714== ==2286714== LEAK SUMMARY: ==2286714== definitely lost: 0 bytes in 0 blocks ==2286714== indirectly lost: 0 bytes in 0 blocks ==2286714== possibly lost: 0 bytes in 0 blocks ==2286714== still reachable: 24 bytes in 2 blocks ==2286714== suppressed: 858,401 bytes in 12,116 blocks ==2286714== Reachable blocks (those to which a pointer was found) are not shown. ==2286714== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2286714== ==2286714== For lists of detected and suppressed errors, rerun with: -s ==2286714== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 25 from 20)