==3006567== Memcheck, a memory error detector ==3006567== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3006567== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3006567== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainDistributedMesh -malloc_debug -malloc_dump -memory_info ==3006567== Parent PID: 2990079 ==3006567== ==3006567== ==3006567== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3006567== Open file descriptor 12: ==3006567== at 0xBC1307D: pipe (pipe.c:29) ==3006567== by 0x1432807D: ??? ==3006567== by 0xFAED4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3006567== by 0xB501418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3006567== by 0xB49AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3006567== by 0xA163D38: PetscInitialize (pinit.c:924) ==3006567== by 0xA03A2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3006567== by 0xA03A32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3006567== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3006567== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3006567== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3006567== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3006567== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3006567== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==3006567== ==3006567== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3006567== at 0xBC17A1C: __open_nocancel (open64_nocancel.c:39) ==3006567== by 0xBB9BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3006567== by 0xB3F3822: ??? ==3006567== by 0xB3F396F: ??? ==3006567== by 0xFB926DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3006567== by 0xFB92938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3006567== by 0xFB48922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3006567== by 0xFAED2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3006567== by 0xB501418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3006567== by 0xB49AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3006567== by 0xA163D38: PetscInitialize (pinit.c:924) ==3006567== by 0xA03A2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3006567== by 0xA03A32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3006567== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3006567== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3006567== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3006567== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3006567== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3006567== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==3006567== ==3006567== Open file descriptor 115: ==3006567== ==3006567== ==3006567== Open file descriptor 112: ==3006567== ==3006567== ==3006567== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainDistributedMesh_valgrind.txt ==3006567== ==3006567== ==3006567== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3006567== ==3006567== ==3006567== ==3006567== HEAP SUMMARY: ==3006567== in use at exit: 836,097 bytes in 11,686 blocks ==3006567== total heap usage: 436,702 allocs, 425,016 frees, 1,639,139,477 bytes allocated ==3006567== ==3006567== LEAK SUMMARY: ==3006567== definitely lost: 0 bytes in 0 blocks ==3006567== indirectly lost: 0 bytes in 0 blocks ==3006567== possibly lost: 0 bytes in 0 blocks ==3006567== still reachable: 24 bytes in 2 blocks ==3006567== suppressed: 836,073 bytes in 11,684 blocks ==3006567== Reachable blocks (those to which a pointer was found) are not shown. ==3006567== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3006567== ==3006567== For lists of detected and suppressed errors, rerun with: -s ==3006567== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 52 from 35)