==3008417== Memcheck, a memory error detector ==3008417== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3008417== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3008417== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==3008417== Parent PID: 2990079 ==3008417== ==3008417== ==3008417== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3008417== Open file descriptor 12: ==3008417== at 0xA8B807D: pipe (pipe.c:29) ==3008417== by 0x1432807D: ??? ==3008417== by 0xFB3A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3008417== by 0xBFB1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3008417== by 0xBF4AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3008417== by 0xAC41D38: PetscInitialize (pinit.c:924) ==3008417== by 0xA1942DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3008417== by 0xA19432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3008417== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3008417== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3008417== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3008417== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3008417== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3008417== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==3008417== ==3008417== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3008417== at 0xA8BCA1C: __open_nocancel (open64_nocancel.c:39) ==3008417== by 0xA840BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3008417== by 0xA1CF822: ??? ==3008417== by 0xA1CF96F: ??? ==3008417== by 0xFBDF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3008417== by 0xFBDF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3008417== by 0xFB95922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3008417== by 0xFB3A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3008417== by 0xBFB1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3008417== by 0xBF4AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3008417== by 0xAC41D38: PetscInitialize (pinit.c:924) ==3008417== by 0xA1942DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3008417== by 0xA19432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3008417== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3008417== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3008417== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3008417== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3008417== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3008417== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==3008417== ==3008417== Open file descriptor 115: ==3008417== ==3008417== ==3008417== Open file descriptor 112: ==3008417== ==3008417== ==3008417== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==3008417== ==3008417== ==3008417== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3008417== ==3008417== ==3008417== ==3008417== HEAP SUMMARY: ==3008417== in use at exit: 835,617 bytes in 11,676 blocks ==3008417== total heap usage: 131,438 allocs, 119,762 frees, 1,568,824,774 bytes allocated ==3008417== ==3008417== LEAK SUMMARY: ==3008417== definitely lost: 0 bytes in 0 blocks ==3008417== indirectly lost: 0 bytes in 0 blocks ==3008417== possibly lost: 0 bytes in 0 blocks ==3008417== still reachable: 24 bytes in 2 blocks ==3008417== suppressed: 835,593 bytes in 11,674 blocks ==3008417== Reachable blocks (those to which a pointer was found) are not shown. ==3008417== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3008417== ==3008417== For lists of detected and suppressed errors, rerun with: -s ==3008417== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)