==1583740== Memcheck, a memory error detector ==1583740== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1583740== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1583740== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==1583740== Parent PID: 1581157 ==1583740== ==1583740== ==1583740== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1583740== Open file descriptor 12: ==1583740== at 0xFC8007D: pipe (pipe.c:29) ==1583740== by 0x196AD07D: ??? ==1583740== by 0x14CB44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1583740== by 0x11582418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1583740== by 0x1151BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1583740== by 0x10212D38: PetscInitialize (pinit.c:924) ==1583740== by 0xF4972DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1583740== by 0xF49732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1583740== by 0x135832: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1583740== by 0x1303C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1583740== by 0x133048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1583740== by 0x132EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1583740== by 0x13357F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1583740== by 0x12E7B5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==1583740== ==1583740== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1583740== at 0xFC84A1C: __open_nocancel (open64_nocancel.c:39) ==1583740== by 0xFC08BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1583740== by 0xF4CC822: ??? ==1583740== by 0xF4CC96F: ??? ==1583740== by 0x14D596DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1583740== by 0x14D59938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1583740== by 0x14D0F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1583740== by 0x14CB42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1583740== by 0x11582418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1583740== by 0x1151BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1583740== by 0x10212D38: PetscInitialize (pinit.c:924) ==1583740== by 0xF4972DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1583740== by 0xF49732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1583740== by 0x135832: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1583740== by 0x1303C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1583740== by 0x133048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1583740== by 0x132EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1583740== by 0x13357F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1583740== by 0x12E7B5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==1583740== ==1583740== Open file descriptor 115: ==1583740== ==1583740== ==1583740== Open file descriptor 112: ==1583740== ==1583740== ==1583740== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==1583740== ==1583740== ==1583740== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1583740== ==1583740== ==1583740== ==1583740== HEAP SUMMARY: ==1583740== in use at exit: 995,526 bytes in 13,910 blocks ==1583740== total heap usage: 2,372,061 allocs, 2,358,151 frees, 2,009,810,073 bytes allocated ==1583740== ==1583740== LEAK SUMMARY: ==1583740== definitely lost: 0 bytes in 0 blocks ==1583740== indirectly lost: 0 bytes in 0 blocks ==1583740== possibly lost: 0 bytes in 0 blocks ==1583740== still reachable: 56 bytes in 3 blocks ==1583740== suppressed: 995,470 bytes in 13,907 blocks ==1583740== Reachable blocks (those to which a pointer was found) are not shown. ==1583740== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1583740== ==1583740== For lists of detected and suppressed errors, rerun with: -s ==1583740== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)