==2318691== Memcheck, a memory error detector ==2318691== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2318691== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2318691== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==2318691== Parent PID: 2317329 ==2318691== ==2318691== ==2318691== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2318691== Open file descriptor 12: ==2318691== at 0x10D0026D: pipe (pipe.c:29) ==2318691== by 0x1976D07D: ??? ==2318691== by 0x14CC64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2318691== by 0x1094D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2318691== by 0x108E6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2318691== by 0xF5BAD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2318691== by 0xF4912DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2318691== by 0xF49132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2318691== by 0x12943D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2318691== by 0x124993: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2318691== by 0x126EA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2318691== by 0x126DA1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2318691== by 0x1273B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2318691== by 0x123195: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==2318691== ==2318691== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2318691== at 0x10D04C0C: __open_nocancel (open64_nocancel.c:39) ==2318691== by 0x10C88BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2318691== by 0x10844822: ??? ==2318691== by 0x1084496F: ??? ==2318691== by 0x14D6B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2318691== by 0x14D6B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2318691== by 0x14D21922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2318691== by 0x14CC62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2318691== by 0x1094D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2318691== by 0x108E6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2318691== by 0xF5BAD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2318691== by 0xF4912DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2318691== by 0xF49132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2318691== by 0x12943D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2318691== by 0x124993: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2318691== by 0x126EA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2318691== by 0x126DA1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2318691== by 0x1273B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2318691== by 0x123195: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==2318691== ==2318691== Open file descriptor 115: ==2318691== ==2318691== ==2318691== Open file descriptor 112: ==2318691== ==2318691== ==2318691== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==2318691== ==2318691== ==2318691== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2318691== ==2318691== ==2318691== ==2318691== HEAP SUMMARY: ==2318691== in use at exit: 857,961 bytes in 12,109 blocks ==2318691== total heap usage: 7,555,734 allocs, 7,543,625 frees, 2,379,113,929 bytes allocated ==2318691== ==2318691== LEAK SUMMARY: ==2318691== definitely lost: 0 bytes in 0 blocks ==2318691== indirectly lost: 0 bytes in 0 blocks ==2318691== possibly lost: 0 bytes in 0 blocks ==2318691== still reachable: 56 bytes in 3 blocks ==2318691== suppressed: 857,905 bytes in 12,106 blocks ==2318691== Reachable blocks (those to which a pointer was found) are not shown. ==2318691== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2318691== ==2318691== For lists of detected and suppressed errors, rerun with: -s ==2318691== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)