==1634346== Memcheck, a memory error detector ==1634346== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1634346== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1634346== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==1634346== Parent PID: 1617643 ==1634346== ==1634346== ==1634346== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1634346== Open file descriptor 12: ==1634346== at 0xC0EE07D: pipe (pipe.c:29) ==1634346== by 0x1432A07D: ??? ==1634346== by 0xFAE54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1634346== by 0xB9DC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1634346== by 0xB975D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1634346== by 0xA66CD38: PetscInitialize (pinit.c:924) ==1634346== by 0xA4D92DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1634346== by 0xA4D932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1634346== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1634346== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1634346== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1634346== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1634346== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1634346== by 0x138285: main (TestBidomainProblem.cpp:19) ==1634346== ==1634346== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1634346== at 0xC0F2A1C: __open_nocancel (open64_nocancel.c:39) ==1634346== by 0xC076BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1634346== by 0xA50E822: ??? ==1634346== by 0xA50E96F: ??? ==1634346== by 0xFB8A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1634346== by 0xFB8A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1634346== by 0xFB40922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1634346== by 0xFAE52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1634346== by 0xB9DC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1634346== by 0xB975D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1634346== by 0xA66CD38: PetscInitialize (pinit.c:924) ==1634346== by 0xA4D92DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1634346== by 0xA4D932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1634346== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1634346== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1634346== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1634346== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1634346== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1634346== by 0x138285: main (TestBidomainProblem.cpp:19) ==1634346== ==1634346== Open file descriptor 115: ==1634346== ==1634346== ==1634346== Open file descriptor 112: ==1634346== ==1634346== ==1634346== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==1634346== ==1634346== ==1634346== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1634346== ==1634346== ==1634346== ==1634346== HEAP SUMMARY: ==1634346== in use at exit: 996,049 bytes in 13,923 blocks ==1634346== total heap usage: 599,383 allocs, 585,460 frees, 1,782,796,833 bytes allocated ==1634346== ==1634346== LEAK SUMMARY: ==1634346== definitely lost: 0 bytes in 0 blocks ==1634346== indirectly lost: 0 bytes in 0 blocks ==1634346== possibly lost: 0 bytes in 0 blocks ==1634346== still reachable: 24 bytes in 2 blocks ==1634346== suppressed: 996,025 bytes in 13,921 blocks ==1634346== Reachable blocks (those to which a pointer was found) are not shown. ==1634346== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1634346== ==1634346== For lists of detected and suppressed errors, rerun with: -s ==1634346== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 103 from 38)