==1619287== Memcheck, a memory error detector ==1619287== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1619287== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1619287== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==1619287== Parent PID: 1617643 ==1619287== ==1619287== ==1619287== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1619287== Open file descriptor 12: ==1619287== at 0xDBE107D: pipe (pipe.c:29) ==1619287== by 0x196AE07D: ??? ==1619287== by 0x14CBE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1619287== by 0x1149B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1619287== by 0x11434D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1619287== by 0x1012BD38: PetscInitialize (pinit.c:924) ==1619287== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1619287== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1619287== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1619287== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1619287== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1619287== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1619287== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1619287== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==1619287== ==1619287== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1619287== at 0xDBE5A1C: __open_nocancel (open64_nocancel.c:39) ==1619287== by 0xDB69BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1619287== by 0xD4D2822: ??? ==1619287== by 0xD4D296F: ??? ==1619287== by 0x14D636DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1619287== by 0x14D63938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1619287== by 0x14D19922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1619287== by 0x14CBE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1619287== by 0x1149B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1619287== by 0x11434D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1619287== by 0x1012BD38: PetscInitialize (pinit.c:924) ==1619287== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1619287== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1619287== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1619287== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1619287== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1619287== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1619287== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1619287== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==1619287== ==1619287== Open file descriptor 115: ==1619287== ==1619287== ==1619287== Open file descriptor 112: ==1619287== ==1619287== ==1619287== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==1619287== ==1619287== ==1619287== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1619287== ==1619287== ==1619287== ==1619287== HEAP SUMMARY: ==1619287== in use at exit: 995,585 bytes in 13,914 blocks ==1619287== total heap usage: 68,397 allocs, 54,483 frees, 1,572,262,702 bytes allocated ==1619287== ==1619287== LEAK SUMMARY: ==1619287== definitely lost: 0 bytes in 0 blocks ==1619287== indirectly lost: 0 bytes in 0 blocks ==1619287== possibly lost: 0 bytes in 0 blocks ==1619287== still reachable: 56 bytes in 3 blocks ==1619287== suppressed: 995,529 bytes in 13,911 blocks ==1619287== Reachable blocks (those to which a pointer was found) are not shown. ==1619287== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1619287== ==1619287== For lists of detected and suppressed errors, rerun with: -s ==1619287== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)