==1618948== Memcheck, a memory error detector ==1618948== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1618948== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1618948== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==1618948== Parent PID: 1617643 ==1618948== ==1618948== ==1618948== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1618948== Open file descriptor 12: ==1618948== at 0xEF9607D: pipe (pipe.c:29) ==1618948== by 0x196AD07D: ??? ==1618948== by 0x13C534CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1618948== by 0xEBE3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1618948== by 0xEB7CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1618948== by 0xD873D38: PetscInitialize (pinit.c:924) ==1618948== by 0xD6E22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1618948== by 0xD6E232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1618948== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1618948== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1618948== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1618948== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1618948== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1618948== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==1618948== ==1618948== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1618948== at 0xEF9AA1C: __open_nocancel (open64_nocancel.c:39) ==1618948== by 0xEF1EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1618948== by 0xD717822: ??? ==1618948== by 0xD71796F: ??? ==1618948== by 0x13CF86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1618948== by 0x13CF8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1618948== by 0x13CAE922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1618948== by 0x13C532DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1618948== by 0xEBE3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1618948== by 0xEB7CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1618948== by 0xD873D38: PetscInitialize (pinit.c:924) ==1618948== by 0xD6E22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1618948== by 0xD6E232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1618948== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1618948== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1618948== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1618948== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1618948== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1618948== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==1618948== ==1618948== Open file descriptor 115: ==1618948== ==1618948== ==1618948== Open file descriptor 112: ==1618948== ==1618948== ==1618948== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==1618948== ==1618948== ==1618948== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1618948== ==1618948== ==1618948== ==1618948== HEAP SUMMARY: ==1618948== in use at exit: 995,542 bytes in 13,911 blocks ==1618948== total heap usage: 4,191,961 allocs, 4,178,050 frees, 2,003,155,303 bytes allocated ==1618948== ==1618948== LEAK SUMMARY: ==1618948== definitely lost: 0 bytes in 0 blocks ==1618948== indirectly lost: 0 bytes in 0 blocks ==1618948== possibly lost: 0 bytes in 0 blocks ==1618948== still reachable: 72 bytes in 4 blocks ==1618948== suppressed: 995,470 bytes in 13,907 blocks ==1618948== Reachable blocks (those to which a pointer was found) are not shown. ==1618948== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1618948== ==1618948== For lists of detected and suppressed errors, rerun with: -s ==1618948== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)