==3109063== Memcheck, a memory error detector ==3109063== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3109063== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3109063== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==3109063== Parent PID: 3092569 ==3109063== ==3109063== ==3109063== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3109063== Open file descriptor 12: ==3109063== at 0xC0F607D: pipe (pipe.c:29) ==3109063== by 0x1432707D: ??? ==3109063== by 0xFAF04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3109063== by 0xB9E4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3109063== by 0xB97DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3109063== by 0xA674D38: PetscInitialize (pinit.c:924) ==3109063== by 0xA4D92DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3109063== by 0xA4D932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3109063== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3109063== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3109063== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3109063== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3109063== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3109063== by 0x138285: main (TestBidomainProblem.cpp:19) ==3109063== ==3109063== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3109063== at 0xC0FAA1C: __open_nocancel (open64_nocancel.c:39) ==3109063== by 0xC07EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3109063== by 0xA514822: ??? ==3109063== by 0xA51496F: ??? ==3109063== by 0xFB956DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3109063== by 0xFB95938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3109063== by 0xFB4B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3109063== by 0xFAF02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3109063== by 0xB9E4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3109063== by 0xB97DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3109063== by 0xA674D38: PetscInitialize (pinit.c:924) ==3109063== by 0xA4D92DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3109063== by 0xA4D932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3109063== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3109063== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3109063== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3109063== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3109063== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3109063== by 0x138285: main (TestBidomainProblem.cpp:19) ==3109063== ==3109063== Open file descriptor 115: ==3109063== ==3109063== ==3109063== Open file descriptor 112: ==3109063== ==3109063== ==3109063== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==3109063== ==3109063== ==3109063== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3109063== ==3109063== ==3109063== ==3109063== HEAP SUMMARY: ==3109063== in use at exit: 836,097 bytes in 11,686 blocks ==3109063== total heap usage: 595,025 allocs, 583,339 frees, 1,751,423,949 bytes allocated ==3109063== ==3109063== LEAK SUMMARY: ==3109063== definitely lost: 0 bytes in 0 blocks ==3109063== indirectly lost: 0 bytes in 0 blocks ==3109063== possibly lost: 0 bytes in 0 blocks ==3109063== still reachable: 24 bytes in 2 blocks ==3109063== suppressed: 836,073 bytes in 11,684 blocks ==3109063== Reachable blocks (those to which a pointer was found) are not shown. ==3109063== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3109063== ==3109063== For lists of detected and suppressed errors, rerun with: -s ==3109063== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 106 from 41)