==3107714== Memcheck, a memory error detector ==3107714== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3107714== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3107714== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellMutationStateTutorial -malloc_debug -malloc_dump -memory_info ==3107714== Parent PID: 3092569 ==3107714== ==3107714== ==3107714== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3107714== Open file descriptor 12: ==3107714== at 0x10CFB07D: pipe (pipe.c:29) ==3107714== by 0x196AB07D: ??? ==3107714== by 0x14C1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3107714== by 0x10603418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3107714== by 0x1059CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3107714== by 0xF293D38: PetscInitialize (pinit.c:924) ==3107714== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3107714== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3107714== by 0x149987: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3107714== by 0x1442D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3107714== by 0x146FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3107714== by 0x146E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3107714== by 0x147509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3107714== by 0x1426F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==3107714== ==3107714== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3107714== at 0x10CFFA1C: __open_nocancel (open64_nocancel.c:39) ==3107714== by 0x10C83BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3107714== by 0xF135822: ??? ==3107714== by 0xF13596F: ??? ==3107714== by 0x14CC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3107714== by 0x14CC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3107714== by 0x14C79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3107714== by 0x14C1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3107714== by 0x10603418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3107714== by 0x1059CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3107714== by 0xF293D38: PetscInitialize (pinit.c:924) ==3107714== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3107714== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3107714== by 0x149987: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3107714== by 0x1442D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3107714== by 0x146FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3107714== by 0x146E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3107714== by 0x147509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3107714== by 0x1426F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==3107714== ==3107714== Open file descriptor 115: ==3107714== ==3107714== ==3107714== Open file descriptor 112: ==3107714== ==3107714== ==3107714== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellMutationStateTutorial_valgrind.txt ==3107714== ==3107714== ==3107714== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3107714== ==3107714== ==3107714== ==3107714== HEAP SUMMARY: ==3107714== in use at exit: 835,564 bytes in 11,673 blocks ==3107714== total heap usage: 4,271,420 allocs, 4,259,747 frees, 2,100,313,586 bytes allocated ==3107714== ==3107714== LEAK SUMMARY: ==3107714== definitely lost: 0 bytes in 0 blocks ==3107714== indirectly lost: 0 bytes in 0 blocks ==3107714== possibly lost: 0 bytes in 0 blocks ==3107714== still reachable: 56 bytes in 3 blocks ==3107714== suppressed: 835,508 bytes in 11,670 blocks ==3107714== Reachable blocks (those to which a pointer was found) are not shown. ==3107714== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3107714== ==3107714== For lists of detected and suppressed errors, rerun with: -s ==3107714== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)