==2366673== Memcheck, a memory error detector ==2366673== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2366673== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2366673== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==2366673== Parent PID: 2357573 ==2366673== ==2366673== ==2366673== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2366673== Open file descriptor 12: ==2366673== at 0x124A826D: pipe (pipe.c:29) ==2366673== by 0x1B42D07D: ??? ==2366673== by 0x165CF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2366673== by 0x120F5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2366673== by 0x1208ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2366673== by 0x10D85D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2366673== by 0x10BF72DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2366673== by 0x10BF732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2366673== by 0x136A09: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2366673== by 0x1312FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2366673== by 0x134048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2366673== by 0x133EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2366673== by 0x13457F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2366673== by 0x12F725: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==2366673== ==2366673== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2366673== at 0x124ACC0C: __open_nocancel (open64_nocancel.c:39) ==2366673== by 0x12430BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2366673== by 0x10C2C822: ??? ==2366673== by 0x10C2C96F: ??? ==2366673== by 0x166746DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2366673== by 0x16674938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2366673== by 0x1662A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2366673== by 0x165CF2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2366673== by 0x120F5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2366673== by 0x1208ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2366673== by 0x10D85D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2366673== by 0x10BF72DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2366673== by 0x10BF732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2366673== by 0x136A09: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2366673== by 0x1312FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2366673== by 0x134048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2366673== by 0x133EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2366673== by 0x13457F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2366673== by 0x12F725: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==2366673== ==2366673== Open file descriptor 115: ==2366673== ==2366673== ==2366673== Open file descriptor 112: ==2366673== ==2366673== ==2366673== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==2366673== ==2366673== ==2366673== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2366673== ==2366673== ==2366673== ==2366673== HEAP SUMMARY: ==2366673== in use at exit: 858,008 bytes in 12,112 blocks ==2366673== total heap usage: 528,097 allocs, 515,985 frees, 1,751,587,665 bytes allocated ==2366673== ==2366673== LEAK SUMMARY: ==2366673== definitely lost: 0 bytes in 0 blocks ==2366673== indirectly lost: 0 bytes in 0 blocks ==2366673== possibly lost: 0 bytes in 0 blocks ==2366673== still reachable: 24 bytes in 2 blocks ==2366673== suppressed: 857,984 bytes in 12,110 blocks ==2366673== Reachable blocks (those to which a pointer was found) are not shown. ==2366673== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2366673== ==2366673== For lists of detected and suppressed errors, rerun with: -s ==2366673== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)