==1669613== Memcheck, a memory error detector ==1669613== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1669613== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1669613== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==1669613== Parent PID: 1654206 ==1669613== ==1669613== ==1669613== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1669613== Open file descriptor 12: ==1669613== at 0x1101D07D: pipe (pipe.c:29) ==1669613== by 0x196AE07D: ??? ==1669613== by 0x14C6C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1669613== by 0x1083E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1669613== by 0x107D7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1669613== by 0xF4CED38: PetscInitialize (pinit.c:924) ==1669613== by 0xF33D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1669613== by 0xF33D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1669613== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1669613== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1669613== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1669613== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1669613== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1669613== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==1669613== ==1669613== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1669613== at 0x11021A1C: __open_nocancel (open64_nocancel.c:39) ==1669613== by 0x10FA5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1669613== by 0xF372822: ??? ==1669613== by 0xF37296F: ??? ==1669613== by 0x14D116DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1669613== by 0x14D11938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1669613== by 0x14CC7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1669613== by 0x14C6C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1669613== by 0x1083E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1669613== by 0x107D7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1669613== by 0xF4CED38: PetscInitialize (pinit.c:924) ==1669613== by 0xF33D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1669613== by 0xF33D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1669613== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1669613== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1669613== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1669613== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1669613== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1669613== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==1669613== ==1669613== Open file descriptor 115: ==1669613== ==1669613== ==1669613== Open file descriptor 112: ==1669613== ==1669613== ==1669613== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==1669613== ==1669613== ==1669613== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1669613== ==1669613== ==1669613== ==1669613== HEAP SUMMARY: ==1669613== in use at exit: 995,526 bytes in 13,910 blocks ==1669613== total heap usage: 3,831,451 allocs, 3,817,541 frees, 1,742,947,692 bytes allocated ==1669613== ==1669613== LEAK SUMMARY: ==1669613== definitely lost: 0 bytes in 0 blocks ==1669613== indirectly lost: 0 bytes in 0 blocks ==1669613== possibly lost: 0 bytes in 0 blocks ==1669613== still reachable: 56 bytes in 3 blocks ==1669613== suppressed: 995,470 bytes in 13,907 blocks ==1669613== Reachable blocks (those to which a pointer was found) are not shown. ==1669613== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1669613== ==1669613== For lists of detected and suppressed errors, rerun with: -s ==1669613== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)