==1669873== Memcheck, a memory error detector ==1669873== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1669873== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1669873== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1669873== Parent PID: 1654206 ==1669873== ==1669873== ==1669873== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1669873== Open file descriptor 12: ==1669873== at 0x10CB107D: pipe (pipe.c:29) ==1669873== by 0x196AE07D: ??? ==1669873== by 0x14C154CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1669873== by 0x105B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1669873== by 0x10552D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1669873== by 0xF223D38: PetscInitialize (pinit.c:924) ==1669873== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1669873== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1669873== by 0x1222CD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1669873== by 0x11D84D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1669873== by 0x11FE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1669873== by 0x11FCDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1669873== by 0x120373: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1669873== by 0x11BC75: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==1669873== ==1669873== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1669873== at 0x10CB5A1C: __open_nocancel (open64_nocancel.c:39) ==1669873== by 0x10C39BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1669873== by 0x104AD822: ??? ==1669873== by 0x104AD96F: ??? ==1669873== by 0x14CBA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1669873== by 0x14CBA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1669873== by 0x14C70922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1669873== by 0x14C152DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1669873== by 0x105B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1669873== by 0x10552D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1669873== by 0xF223D38: PetscInitialize (pinit.c:924) ==1669873== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1669873== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1669873== by 0x1222CD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1669873== by 0x11D84D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1669873== by 0x11FE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1669873== by 0x11FCDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1669873== by 0x120373: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1669873== by 0x11BC75: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==1669873== ==1669873== Open file descriptor 115: ==1669873== ==1669873== ==1669873== Open file descriptor 112: ==1669873== ==1669873== ==1669873== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==1669873== ==1669873== ==1669873== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1669873== ==1669873== ==1669873== ==1669873== HEAP SUMMARY: ==1669873== in use at exit: 995,526 bytes in 13,910 blocks ==1669873== total heap usage: 3,350,456 allocs, 3,336,546 frees, 2,500,267,120 bytes allocated ==1669873== ==1669873== LEAK SUMMARY: ==1669873== definitely lost: 0 bytes in 0 blocks ==1669873== indirectly lost: 0 bytes in 0 blocks ==1669873== possibly lost: 0 bytes in 0 blocks ==1669873== still reachable: 56 bytes in 3 blocks ==1669873== suppressed: 995,470 bytes in 13,907 blocks ==1669873== Reachable blocks (those to which a pointer was found) are not shown. ==1669873== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1669873== ==1669873== For lists of detected and suppressed errors, rerun with: -s ==1669873== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)