==2399960== Memcheck, a memory error detector ==2399960== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2399960== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2399960== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2399960== Parent PID: 2397760 ==2399960== ==2399960== ==2399960== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2399960== Open file descriptor 12: ==2399960== at 0xFD9926D: pipe (pipe.c:29) ==2399960== by 0x1976F07D: ??? ==2399960== by 0x14E7F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2399960== by 0x119F4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2399960== by 0x1198DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2399960== by 0x10684D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2399960== by 0xF0F52DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2399960== by 0xF0F532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2399960== by 0x1D43E2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2399960== by 0x1CDD79: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2399960== by 0x1D14B0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2399960== by 0x1D1350: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2399960== by 0x1D19E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2399960== by 0x1CC195: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==2399960== ==2399960== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2399960== at 0xFD9DC0C: __open_nocancel (open64_nocancel.c:39) ==2399960== by 0xFD21BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2399960== by 0xF12A822: ??? ==2399960== by 0xF12A96F: ??? ==2399960== by 0x14F246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2399960== by 0x14F24938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2399960== by 0x14EDA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2399960== by 0x14E7F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2399960== by 0x119F4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2399960== by 0x1198DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2399960== by 0x10684D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2399960== by 0xF0F52DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2399960== by 0xF0F532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2399960== by 0x1D43E2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2399960== by 0x1CDD79: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2399960== by 0x1D14B0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2399960== by 0x1D1350: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2399960== by 0x1D19E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2399960== by 0x1CC195: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==2399960== ==2399960== Open file descriptor 115: ==2399960== ==2399960== ==2399960== Open file descriptor 112: ==2399960== ==2399960== ==2399960== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==2399960== ==2399960== ==2399960== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2399960== ==2399960== ==2399960== ==2399960== HEAP SUMMARY: ==2399960== in use at exit: 857,961 bytes in 12,109 blocks ==2399960== total heap usage: 6,556,411 allocs, 6,544,302 frees, 8,227,986,471 bytes allocated ==2399960== ==2399960== LEAK SUMMARY: ==2399960== definitely lost: 0 bytes in 0 blocks ==2399960== indirectly lost: 0 bytes in 0 blocks ==2399960== possibly lost: 0 bytes in 0 blocks ==2399960== still reachable: 56 bytes in 3 blocks ==2399960== suppressed: 857,905 bytes in 12,106 blocks ==2399960== Reachable blocks (those to which a pointer was found) are not shown. ==2399960== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2399960== ==2399960== For lists of detected and suppressed errors, rerun with: -s ==2399960== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)