==1692447== Memcheck, a memory error detector ==1692447== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1692447== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1692447== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1692447== Parent PID: 1690613 ==1692447== ==1692447== ==1692447== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1692447== Open file descriptor 12: ==1692447== at 0xF8CD07D: pipe (pipe.c:29) ==1692447== by 0x196AE07D: ??? ==1692447== by 0x14CB54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1692447== by 0x1149B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1692447== by 0x11434D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1692447== by 0x10129D38: PetscInitialize (pinit.c:924) ==1692447== by 0xF1892DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1692447== by 0xF18932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1692447== by 0x2E2582: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1692447== by 0x2D9079: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1692447== by 0x2DD8D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1692447== by 0x2DD776: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1692447== by 0x2DDE0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1692447== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==1692447== ==1692447== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1692447== at 0xF8D1A1C: __open_nocancel (open64_nocancel.c:39) ==1692447== by 0xF855BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1692447== by 0xF1BE822: ??? ==1692447== by 0xF1BE96F: ??? ==1692447== by 0x14D5A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1692447== by 0x14D5A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1692447== by 0x14D10922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1692447== by 0x14CB52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1692447== by 0x1149B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1692447== by 0x11434D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1692447== by 0x10129D38: PetscInitialize (pinit.c:924) ==1692447== by 0xF1892DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1692447== by 0xF18932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1692447== by 0x2E2582: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1692447== by 0x2D9079: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1692447== by 0x2DD8D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1692447== by 0x2DD776: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1692447== by 0x2DDE0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1692447== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==1692447== ==1692447== Open file descriptor 115: ==1692447== ==1692447== ==1692447== Open file descriptor 112: ==1692447== ==1692447== ==1692447== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==1692447== ==1692447== ==1692447== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1692447== ==1692447== ==1692447== ==1692447== HEAP SUMMARY: ==1692447== in use at exit: 995,526 bytes in 13,910 blocks ==1692447== total heap usage: 20,205,265 allocs, 20,191,355 frees, 2,796,033,690 bytes allocated ==1692447== ==1692447== LEAK SUMMARY: ==1692447== definitely lost: 0 bytes in 0 blocks ==1692447== indirectly lost: 0 bytes in 0 blocks ==1692447== possibly lost: 0 bytes in 0 blocks ==1692447== still reachable: 56 bytes in 3 blocks ==1692447== suppressed: 995,470 bytes in 13,907 blocks ==1692447== Reachable blocks (those to which a pointer was found) are not shown. ==1692447== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1692447== ==1692447== For lists of detected and suppressed errors, rerun with: -s ==1692447== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)