==3272311== Memcheck, a memory error detector ==3272311== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3272311== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3272311== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==3272311== Parent PID: 3253918 ==3272311== ==3272311== ==3272311== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3272311== Open file descriptor 12: ==3272311== at 0xA7D107D: pipe (pipe.c:29) ==3272311== by 0x1432807D: ??? ==3272311== by 0xFB3A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3272311== by 0xBECA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3272311== by 0xBE63D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3272311== by 0xAB5AD38: PetscInitialize (pinit.c:924) ==3272311== by 0xA0AD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3272311== by 0xA0AD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3272311== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3272311== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3272311== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3272311== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3272311== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3272311== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==3272311== ==3272311== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3272311== at 0xA7D5A1C: __open_nocancel (open64_nocancel.c:39) ==3272311== by 0xA759BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3272311== by 0xA0E8822: ??? ==3272311== by 0xA0E896F: ??? ==3272311== by 0xFBDF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3272311== by 0xFBDF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3272311== by 0xFB95922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3272311== by 0xFB3A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3272311== by 0xBECA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3272311== by 0xBE63D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3272311== by 0xAB5AD38: PetscInitialize (pinit.c:924) ==3272311== by 0xA0AD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3272311== by 0xA0AD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3272311== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3272311== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3272311== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3272311== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3272311== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3272311== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==3272311== ==3272311== Open file descriptor 115: ==3272311== ==3272311== ==3272311== Open file descriptor 112: ==3272311== ==3272311== ==3272311== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==3272311== ==3272311== ==3272311== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3272311== ==3272311== ==3272311== ==3272311== HEAP SUMMARY: ==3272311== in use at exit: 836,028 bytes in 11,682 blocks ==3272311== total heap usage: 843,589 allocs, 831,907 frees, 1,645,501,874 bytes allocated ==3272311== ==3272311== LEAK SUMMARY: ==3272311== definitely lost: 0 bytes in 0 blocks ==3272311== indirectly lost: 0 bytes in 0 blocks ==3272311== possibly lost: 0 bytes in 0 blocks ==3272311== still reachable: 24 bytes in 2 blocks ==3272311== suppressed: 836,004 bytes in 11,680 blocks ==3272311== Reachable blocks (those to which a pointer was found) are not shown. ==3272311== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3272311== ==3272311== For lists of detected and suppressed errors, rerun with: -s ==3272311== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 60 from 34)