==3256115== Memcheck, a memory error detector ==3256115== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3256115== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3256115== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==3256115== Parent PID: 3253918 ==3256115== ==3256115== ==3256115== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3256115== Open file descriptor 12: ==3256115== at 0xF92D07D: pipe (pipe.c:29) ==3256115== by 0x196AB07D: ??? ==3256115== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3256115== by 0x1158A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3256115== by 0x11523D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3256115== by 0x1021AD38: PetscInitialize (pinit.c:924) ==3256115== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3256115== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3256115== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3256115== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3256115== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3256115== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3256115== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3256115== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==3256115== ==3256115== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3256115== at 0xF931A1C: __open_nocancel (open64_nocancel.c:39) ==3256115== by 0xF8B5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3256115== by 0xF135822: ??? ==3256115== by 0xF13596F: ??? ==3256115== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3256115== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3256115== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3256115== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3256115== by 0x1158A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3256115== by 0x11523D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3256115== by 0x1021AD38: PetscInitialize (pinit.c:924) ==3256115== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3256115== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3256115== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3256115== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3256115== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3256115== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3256115== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3256115== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==3256115== ==3256115== Open file descriptor 115: ==3256115== ==3256115== ==3256115== Open file descriptor 112: ==3256115== ==3256115== ==3256115== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==3256115== ==3256115== ==3256115== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3256115== ==3256115== ==3256115== ==3256115== HEAP SUMMARY: ==3256115== in use at exit: 835,596 bytes in 11,674 blocks ==3256115== total heap usage: 17,981,111 allocs, 17,969,437 frees, 30,273,350,089 bytes allocated ==3256115== ==3256115== LEAK SUMMARY: ==3256115== definitely lost: 0 bytes in 0 blocks ==3256115== indirectly lost: 0 bytes in 0 blocks ==3256115== possibly lost: 0 bytes in 0 blocks ==3256115== still reachable: 88 bytes in 4 blocks ==3256115== suppressed: 835,508 bytes in 11,670 blocks ==3256115== Reachable blocks (those to which a pointer was found) are not shown. ==3256115== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3256115== ==3256115== For lists of detected and suppressed errors, rerun with: -s ==3256115== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)