==3270112== Memcheck, a memory error detector ==3270112== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3270112== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3270112== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningVertexBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==3270112== Parent PID: 3253918 ==3270112== ==3270112== ==3270112== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3270112== Open file descriptor 12: ==3270112== at 0x1257907D: pipe (pipe.c:29) ==3270112== by 0x1B36D07D: ??? ==3270112== by 0x164F34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3270112== by 0x11E81418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3270112== by 0x11E1AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3270112== by 0x10AE3D38: PetscInitialize (pinit.c:924) ==3270112== by 0x109BA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3270112== by 0x109BA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3270112== by 0x11FDA3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3270112== by 0x11B613: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3270112== by 0x11D8AE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3270112== by 0x11D7AA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3270112== by 0x11DDBD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3270112== by 0x119E15: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==3270112== ==3270112== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3270112== at 0x1257DA1C: __open_nocancel (open64_nocancel.c:39) ==3270112== by 0x12501BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3270112== by 0x11D73822: ??? ==3270112== by 0x11D7396F: ??? ==3270112== by 0x165986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3270112== by 0x16598938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3270112== by 0x1654E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3270112== by 0x164F32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3270112== by 0x11E81418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3270112== by 0x11E1AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3270112== by 0x10AE3D38: PetscInitialize (pinit.c:924) ==3270112== by 0x109BA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3270112== by 0x109BA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3270112== by 0x11FDA3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3270112== by 0x11B613: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3270112== by 0x11D8AE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3270112== by 0x11D7AA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3270112== by 0x11DDBD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3270112== by 0x119E15: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==3270112== ==3270112== Open file descriptor 115: ==3270112== ==3270112== ==3270112== Open file descriptor 112: ==3270112== ==3270112== ==3270112== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedCryptSimulationsTutorial_valgrind.txt ==3270112== ==3270112== ==3270112== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3270112== ==3270112== ==3270112== ==3270112== HEAP SUMMARY: ==3270112== in use at exit: 835,729 bytes in 11,678 blocks ==3270112== total heap usage: 1,627,202 allocs, 1,615,524 frees, 1,660,511,539 bytes allocated ==3270112== ==3270112== LEAK SUMMARY: ==3270112== definitely lost: 0 bytes in 0 blocks ==3270112== indirectly lost: 0 bytes in 0 blocks ==3270112== possibly lost: 0 bytes in 0 blocks ==3270112== still reachable: 136 bytes in 4 blocks ==3270112== suppressed: 835,593 bytes in 11,674 blocks ==3270112== Reachable blocks (those to which a pointer was found) are not shown. ==3270112== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3270112== ==3270112== For lists of detected and suppressed errors, rerun with: -s ==3270112== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)