==2439139== Memcheck, a memory error detector ==2439139== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2439139== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2439139== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==2439139== Parent PID: 2437924 ==2439139== ==2439139== ==2439139== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2439139== Open file descriptor 12: ==2439139== at 0xED0826D: pipe (pipe.c:29) ==2439139== by 0x1976E07D: ??? ==2439139== by 0x138B34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2439139== by 0xE957418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2439139== by 0xE8F0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2439139== by 0xD5C4D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2439139== by 0xD4992DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2439139== by 0xD49932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2439139== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2439139== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2439139== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2439139== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2439139== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2439139== by 0x113935: main (TestCellSrn.cpp:18) ==2439139== ==2439139== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2439139== at 0xED0CC0C: __open_nocancel (open64_nocancel.c:39) ==2439139== by 0xEC90BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2439139== by 0xE84E822: ??? ==2439139== by 0xE84E96F: ??? ==2439139== by 0x139586DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2439139== by 0x13958938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2439139== by 0x1390E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2439139== by 0x138B32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2439139== by 0xE957418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2439139== by 0xE8F0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2439139== by 0xD5C4D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2439139== by 0xD4992DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2439139== by 0xD49932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2439139== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2439139== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2439139== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2439139== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2439139== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2439139== by 0x113935: main (TestCellSrn.cpp:18) ==2439139== ==2439139== Open file descriptor 115: ==2439139== ==2439139== ==2439139== Open file descriptor 112: ==2439139== ==2439139== ==2439139== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==2439139== ==2439139== ==2439139== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2439139== ==2439139== ==2439139== ==2439139== HEAP SUMMARY: ==2439139== in use at exit: 858,088 bytes in 12,114 blocks ==2439139== total heap usage: 71,992 allocs, 59,878 frees, 1,543,857,048 bytes allocated ==2439139== ==2439139== LEAK SUMMARY: ==2439139== definitely lost: 0 bytes in 0 blocks ==2439139== indirectly lost: 0 bytes in 0 blocks ==2439139== possibly lost: 0 bytes in 0 blocks ==2439139== still reachable: 120 bytes in 4 blocks ==2439139== suppressed: 857,968 bytes in 12,110 blocks ==2439139== Reachable blocks (those to which a pointer was found) are not shown. ==2439139== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2439139== ==2439139== For lists of detected and suppressed errors, rerun with: -s ==2439139== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)